FAM69C, chr18:72102963-72125179 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4892217 chr18:72125387 FAM69C [+208bp] C - 13 A vs. C 0.092 (A) 0.2 (A) >1 (-) 9 (-) >0.05
rs12964619 chr18:72163410 CNDP2 C - 13 A vs. G 0.292 (A) 0.3 (A) >1 (-) 1 (-) >0.05
rs11876158 chr18:72132622 FAM69C [+7443bp] C - 13 A vs. G 0.283 (G) 0.25 (G) <1 (-) 0 (-) >0.05
rs12971120 chr18:72174023 CNDP2 C - 13 A vs. G 0.183 (G) 0.292 (G) >1 (-) 0 (-) >0.05
rs12606654 chr18:72126710 FAM69C [+1531bp] C - 13 A vs. G 0.117 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs35486875 chr18:72077388 FAM69C [-25575bp] C - 11 C vs. G 0.067 (G) - <1 (-) 0 (-) >0.05
rs1256725 chr18:72068675 FAM69C [-34288bp] C - 13 A vs. G 0.225 (A) 0.067 (A) <1 (-) 17 (-) >0.05
rs1991277 chr18:72113201 FAM69C C - 13 A vs. G 0.4 (A) 0.133 (A) <1 (-) 39 (-) >0.05
rs72973850 chr18:72077353 FAM69C [-25610bp] C - 11 A vs. T 0.067 (A) - >1 (-) 0 (-) >0.05
rs7230373 chr18:72107848 FAM69C C - 13 T vs. G 0.233 (G) 0.017 (G) <1 (-) 0 (-) >0.05
rs75063264 chr18:72157307 CNDP2 [-5744bp] C - 13 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs11876710 chr18:72159310 CNDP2 [-3741bp] C - 13 A vs. T 0.425 (A) 0.317 (T) >1 (-) 0 (-) >0.05
rs77531273 chr18:72144841 CNDP2 [-18210bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11662446 chr18:72073178 FAM69C [-29785bp] C - 13 T vs. C 0.083 (T) 0.183 (T) >1 (-) 27 (-) >0.05
rs3829640 chr18:72174980 CNDP2 C - 13 A vs. G 0.183 (G) 0.292 (G) >1 (-) 0 (-) >0.05
rs1256734 chr18:72065192 FAM69C [-37771bp] C - 13 T vs. C 0.217 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs11661827 chr18:72073120 FAM69C [-29843bp] C - 13 A vs. G 0.083 (A) 0.183 (A) >1 (-) 19 (-) >0.05
rs75474034 chr18:72054339 C18orf63 [+27917bp] C - 13 T vs. C 0.058 (T) 0.058 (T) >1 (-) 37 (-) >0.05
rs17841702 chr18:72163521 CNDP2 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs71168485 chr18:72092338 FAM69C [-10625bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs62622364 chr18:72057442 C18orf63 [+31020bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs1035761 chr18:72151320 CNDP2 [-11731bp] C - 13 A vs. G 0.292 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs747175 chr18:72154720 CNDP2 [-8331bp] C - 13 T vs. C 0.4 (C) 0.317 (T) <1 (-) 0 (-) >0.05
rs76942880 chr18:72137057 FAM69C [+11878bp] C - 13 A vs. T 0.025 (T) - >1 (-) 0 (-) >0.05
rs76342557 chr18:72132289 FAM69C [+7110bp] C - 13 A vs. C - 0.133 (A) >1 (-) 0 (-) >0.05
rs34111161 chr18:72112520 FAM69C C - 13 T vs. C 0.4 (T) 0.133 (T) <1 (-) 40 (-) >0.05
rs12961670 chr18:72142125 FAM69C [+16946bp] C - 13 A vs. G 0.292 (A) 0.375 (A) >1 (-) 0 (-) >0.05
rs72973845 chr18:72077017 FAM69C [-25946bp] C - 11 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs17234039 chr18:72058410 C18orf63 [+31988bp] C - 13 T vs. C 0.217 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs17807814 chr18:72058050 C18orf63 [+31628bp] C - 13 C vs. G 0.217 (G) 0.067 (G) <1 (-) 0 (-) >0.05
rs2114229 chr18:72139287 FAM69C [+14108bp] C - 13 T vs. C 0.292 (T) 0.375 (T) >1 (-) 0 (-) >0.05
rs2114230 chr18:72139229 FAM69C [+14050bp] C - 13 T vs. C 0.317 (C) 0.383 (C) <1 (-) 0 (-) >0.05
rs12604306 chr18:72140217 FAM69C [+15038bp] C - 13 A vs. G 0.292 (A) 0.375 (A) >1 (-) 0 (-) >0.05
rs17089210 chr18:72064864 FAM69C [-38099bp] C - 13 C vs. G 0.208 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs36089221 chr18:72174456 CNDP2 C - 13 T vs. C 0.217 (T) - <1 (-) 0 (-) >0.05
rs7236186 chr18:72159648 CNDP2 [-3403bp] C - 3 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs77871774 chr18:72131567 FAM69C [+6388bp] C - 13 T vs. C 0.025 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs2278156 chr18:72103133 FAM69C C - 13 T vs. C 0.125 (T) 0.483 (T) >1 (-) 0 (-) >0.05
rs12957514 chr18:72135323 FAM69C [+10144bp] C - 13 A vs. T 0.292 (A) 0.383 (A) >1 (-) 0 (-) >0.05
rs2346060 chr18:72154410 CNDP2 [-8641bp] C - 13 A vs. G 0.425 (G) 0.317 (A) <1 (-) 0 (-) >0.05
rs76479806 chr18:72053910 C18orf63 [+27488bp] C - 13 A vs. G 0.058 (G) 0.042 (G) <1 (-) 36 (-) >0.05
rs28660603 chr18:72065230 FAM69C [-37733bp] C - 13 A vs. G - - >1 (-) 9 (-) >0.05
rs35648325 chr18:72111732 FAM69C C - 13 T vs. G 0.4 (G) 0.15 (G) >1 (-) 40 (-) >0.05
rs78499812 chr18:72056873 C18orf63 [+30451bp] C - 13 A vs. G 0.092 (A) - <1 (-) 42 (-) >0.05
rs72973851 chr18:72077441 FAM69C [-25522bp] C - 10 A vs. G 0.067 (G) - <1 (-) 0 (-) >0.05
rs3794954 chr18:72175152 CNDP2 C - 13 A vs. G 0.4 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs61102330 chr18:72170910 CNDP2 C - 13 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs76073111 chr18:72056243 C18orf63 [+29821bp] C - 13 A vs. G 0.058 (G) - <1 (-) 35 (-) >0.05
rs9949663 chr18:72108494 FAM69C C - 13 A vs. G 0.233 (A) 0.008 (A) >1 (-) 0 (-) >0.05
rs10163580 chr18:72100196 FAM69C [-2767bp] C - 13 A vs. G 0.258 (A) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.