FAM69C, chr18:72102963-72125179 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs929995 chr18:72072016 FAM69C [-30947bp] C - 13 A vs. G 0.192 (G) 0.042 (G) <1 (-) 26 (-) >0.05
rs8084115 chr18:72161600 CNDP2 [-1451bp] C - 13 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs1149882 chr18:72064247 C18orf63 [+37825bp] C - 13 A vs. G 0.083 (A) 0.158 (A) >1 (-) 0 (-) >0.05
rs6566805 chr18:72106862 FAM69C C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs747176 chr18:72154931 CNDP2 [-8120bp] C - 13 A vs. G 0.158 (A) 0.275 (A) <1 (-) 0 (-) >0.05
rs1895886 chr18:72144483 CNDP2 [-18568bp] C - 13 T vs. C 0.283 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs34868541 chr18:72175170 CNDP2 C - 13 A vs. G 0.217 (G) - >1 (-) 0 (-) >0.05
rs12965928 chr18:72133648 FAM69C [+8469bp] C - 13 T vs. C 0.292 (C) 0.375 (C) <1 (-) 0 (-) >0.05
rs11665154 chr18:72147006 CNDP2 [-16045bp] C - 13 A vs. C 0.308 (C) 0.383 (C) <1 (-) 0 (-) >0.05
rs34080272 chr18:72171927 CNDP2 C - 13 C vs. G 0.217 (C) - <1 (-) 0 (-) >0.05
rs4891557 chr18:72170299 CNDP2 C - 13 T vs. C 0.167 (T) 0.283 (T) <1 (-) 0 (-) >0.05
rs67891398 chr18:72064991 FAM69C [-37972bp] C - 13 T vs. G 0.158 (T) 0.058 (T) <1 (-) 18 (-) >0.05
rs17062295 chr18:72065084 FAM69C [-37879bp] C - 13 A vs. G 0.15 (G) - >1 (-) 18 (-) >0.05
rs2840009 chr18:72064390 C18orf63 [+37968bp] C - 13 T vs. C 0.158 (T) - <1 (-) 17 (-) >0.05
rs60367294 chr18:72101232 FAM69C [-1731bp] C - 13 T vs. C 0.25 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs2162258 chr18:72099971 FAM69C [-2992bp] C - 13 A vs. G 0.275 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs60695997 chr18:72169073 CNDP2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2019247 chr18:72113460 FAM69C C - 8 C vs. G 0.008 (G) 0.475 (G) <1 (-) 49 (-) >0.05
rs4891558 chr18:72170359 CNDP2 C - 13 T vs. C 0.167 (C) 0.283 (C) >1 (-) 0 (-) >0.05
rs12608037 chr18:72169395 CNDP2 C - 13 A vs. G 0.167 (G) 0.283 (G) >1 (-) 0 (-) >0.05
rs4892225 chr18:72134852 FAM69C [+9673bp] C - 13 T vs. C 0.283 (C) 0.375 (C) <1 (-) 0 (-) >0.05
rs2303463 chr18:72168608 CNDP2 C - 13 A vs. G 0.167 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs79276003 chr18:72053785 C18orf63 [+27363bp] C - 13 T vs. C 0.058 (T) - >1 (-) 36 (-) >0.05
rs113224755 chr18:72168002 CNDP2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs6566811 chr18:72163592 CNDP2 C - 13 A vs. G 0.425 (A) 0.3 (G) >1 (-) 0 (-) >0.05
rs11662825 chr18:72147350 CNDP2 [-15701bp] C - 13 T vs. C 0.283 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs2510027 chr18:72068087 FAM69C [-34876bp] C - 13 A vs. C 0.283 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs75355581 chr18:72072773 FAM69C [-30190bp] C - 13 A vs. G - - <1 (-) 24 (-) >0.05
rs4892220 chr18:72126328 FAM69C [+1149bp] C - 13 A vs. T 0.1 (T) 0.383 (T) >1 (-) 3 (-) >0.05
rs1046407 chr18:72102997 FAM69C C - 13 A vs. G 0.25 (A) - >1 (-) 0 (-) >0.05
rs12605820 chr18:72167802 CNDP2 C - 13 A vs. G 0.167 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs3764510 chr18:72166846 CNDP2 C - 13 A vs. G 0.167 (G) 0.283 (G) >1 (-) 0 (-) >0.05
rs8084410 chr18:72168486 CNDP2 C - 13 T vs. C 0.192 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs7234384 chr18:72171884 CNDP2 C - 13 T vs. C 0.392 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs1820432 chr18:72171173 CNDP2 C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs890338 chr18:72160610 CNDP2 [-2441bp] C - 13 A vs. G 0.408 (G) 0.292 (A) <1 (-) 0 (-) >0.05
rs1271587 chr18:72073581 FAM69C [-29382bp] C - 5 A vs. G 0.075 (G) 0.192 (G) >1 (-) 51 (-) >0.05
rs9961740 chr18:72108304 FAM69C C - 13 T vs. C 0.25 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs77109055 chr18:72137989 FAM69C [+12810bp] C - 13 A vs. T 0.025 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs8094784 chr18:72172727 CNDP2 C - 13 T vs. G 0.408 (T) 0.3 (G) >1 (-) 0 (-) >0.05
rs7237740 chr18:72163160 CNDP2 C - 13 T vs. C 0.417 (T) 0.317 (C) >1 (-) 0 (-) >0.05
rs77042279 chr18:72166590 CNDP2 C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs59938622 chr18:72067508 FAM69C [-35455bp] C - 13 C vs. G 0.217 (C) 0.075 (C) <1 (-) 15 (-) >0.05
rs1469295 chr18:72100951 FAM69C [-2012bp] C - 13 A vs. C 0.325 (A) 0.217 (A) >1 (-) 47 (-) >0.05
rs17089315 chr18:72131940 FAM69C [+6761bp] C - 13 T vs. C 0.025 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs1271047 chr18:72067682 FAM69C [-35281bp] C - 13 A vs. G 0.217 (A) 0.067 (A) <1 (-) 16 (-) >0.05
rs62097447 chr18:72169504 CNDP2 C - 13 A vs. T 0.417 (A) 0.317 (T) >1 (-) 0 (-) >0.05
rs146570942 chr18:72099617 FAM69C [-3346bp] C - 8 A vs. G - - <1 (-) 21 (-) >0.05
rs71359047 chr18:72092384 FAM69C [-10579bp] C - 13 A vs. G - - >1 (-) 6 (-) >0.05
rs8083001 chr18:72165058 CNDP2 C - 13 T vs. C 0.192 (C) 0.283 (C) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.