FAM69C, chr18:72102963-72125179 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs74328061 chr18:72162064 CNDP2 [-987bp] C - 13 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs17809342 chr18:72104514 FAM69C C - 13 A vs. G 0.25 (A) 0.017 (A) >1 (-) 0 (-) >0.05
rs77928143 chr18:72131821 FAM69C [+6642bp] C - 13 A vs. G 0.025 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs3794956 chr18:72174701 CNDP2 C - 13 A vs. G 0.408 (A) 0.325 (G) >1 (-) 0 (-) >0.05
rs3794957 chr18:72174601 CNDP2 C - 13 T vs. C 0.425 (T) 0.325 (C) >1 (-) 0 (-) >0.05
rs4113942 chr18:72171105 CNDP2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs1256723 chr18:72069279 FAM69C [-33684bp] C - 13 T vs. C 0.217 (T) 0.108 (T) <1 (-) 16 (-) >0.05
rs75807483 chr18:72073588 FAM69C [-29375bp] C - 4 A vs. C 0.075 (A) 0.192 (A) <1 (-) 62 (-) >0.05
rs1004254 chr18:72064441 C18orf63 [+38019bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1559803 chr18:72117396 FAM69C C - 12 A vs. T 0.383 (T) 0.483 (T) <1 (-) 0 (-) >0.05
rs11151959 chr18:72172791 CNDP2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1256722 chr18:72069485 FAM69C [-33478bp] C - 13 A vs. T - - <1 (-) 17 (-) >0.05
rs9966606 chr18:72069476 FAM69C [-33487bp] C - 13 T vs. C - - <1 (-) 17 (-) >0.05
rs76691799 chr18:72143648 FAM69C [+18469bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs76705569 chr18:72135076 FAM69C [+9897bp] C - 13 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs75099894 chr18:72141062 FAM69C [+15883bp] C - 13 T vs. C 0.017 (C) 0.008 (C) <1 (-) 0 (-) >0.05
rs6566808 chr18:72141161 FAM69C [+15982bp] C - 13 A vs. T 0.025 (A) 0.008 (A) >1 (-) 0 (-) >0.05
rs79139961 chr18:72141096 FAM69C [+15917bp] C - 13 A vs. G - 0.008 (G) <1 (-) 0 (-) >0.05
rs7241558 chr18:72169267 CNDP2 C - 13 A vs. T 0.192 (T) 0.275 (T) >1 (-) 0 (-) >0.05
rs75530841 chr18:72140168 FAM69C [+14989bp] C - 13 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs4891559 chr18:72170397 CNDP2 C - 13 A vs. G 0.192 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs1270538 chr18:72070270 FAM69C [-32693bp] C - 13 T vs. C 0.217 (T) 0.083 (T) <1 (-) 18 (-) >0.05
rs80123052 chr18:72144460 CNDP2 [-18591bp] C - 13 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs11873377 chr18:72162696 CNDP2 [-355bp] C - 13 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05
rs77919671 chr18:72133930 FAM69C [+8751bp] C - 13 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs1149883 chr18:72064634 C18orf63 [+38212bp] C - 13 A vs. G 0.25 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs7237516 chr18:72066631 FAM69C [-36332bp] C - 13 A vs. G - - <1 (-) 14 (-) >0.05
rs74771020 chr18:72133733 FAM69C [+8554bp] C - 13 T vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs1256724 chr18:72069249 FAM69C [-33714bp] C - 13 A vs. G 0.3 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs61197611 chr18:72143358 FAM69C [+18179bp] C - 13 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs34676212 chr18:72170006 CNDP2 C - 13 A vs. G 0.192 (G) 0.283 (G) >1 (-) 0 (-) >0.05
rs77452272 chr18:72137514 FAM69C [+12335bp] C - 13 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs11660492 chr18:72171610 CNDP2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs77849851 chr18:72053717 C18orf63 [+27295bp] C - 13 T vs. C 0.05 (C) - <1 (-) 41 (-) >0.05
rs72973818 chr18:72072707 FAM69C [-30256bp] C - 13 C vs. G - - >1 (-) 31 (-) >0.05
rs8084109 chr18:72168312 CNDP2 C - 13 A vs. T 0.192 (A) 0.283 (A) >1 (-) 0 (-) >0.05
rs75139068 chr18:72151853 CNDP2 [-11198bp] C - 13 A vs. T 0.025 (T) - >1 (-) 0 (-) >0.05
rs7242622 chr18:72116928 FAM69C C - 12 C vs. G 0.383 (C) 0.225 (G) <1 (-) 21 (-) >0.05
rs3794955 chr18:72174827 CNDP2 C - 13 T vs. C 0.167 (T) 0.292 (T) <1 (-) 0 (-) >0.05
rs7229256 chr18:72169129 CNDP2 C - 13 A vs. T 0.167 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs17089246 chr18:72073604 FAM69C [-29359bp] C - 4 A vs. C 0.075 (C) 0.2 (C) >1 (-) 64 (-) >0.05
rs112883853 chr18:72151720 CNDP2 [-11331bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs141414414 chr18:72151555 CNDP2 [-11496bp] C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs2288265 chr18:72116993 FAM69C C - 12 T vs. C 0.358 (T) 0.192 (C) >1 (-) 20 (-) >0.05
rs4113943 chr18:72171082 CNDP2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2288264 chr18:72116996 FAM69C C - 12 T vs. G 0.358 (T) 0.183 (G) >1 (-) 19 (-) >0.05
rs71359051 chr18:72169723 CNDP2 C - 13 A vs. G 0.167 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs2288263 chr18:72116998 FAM69C C - 12 T vs. G 0.342 (T) 0.183 (G) >1 (-) 19 (-) >0.05
rs75362252 chr18:72127740 FAM69C [+2561bp] C - 13 T vs. C - 0.05 (T) <1 (-) 0 (-) >0.05
rs77718648 chr18:72149182 CNDP2 [-13869bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.