GPATCH8, chr17:42472652-42580798 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs850732 chr17:42454243 ITGA2B All: C 105,041 14 C vs. T - - 0.92 (0.89-0.95) 0 (0-42) 2.33e-06
Meta_image?name=rs850732

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs850732 chr17:42454243 ITGA2B All: C 105,041 14 C vs. T - - 0.92 (0.89-0.95) 0 (0-42) 2.33e-06
rs850729 chr17:42454806 ITGA2B All: C 105,041 14 C vs. T - - 0.92 (0.89-0.95) 0 (0-41) 2.49e-06
rs5910 chr17:42449789 ITGA2B All: C 105,041 14 A vs. G 0.333 (A) 0.35 (A) 1.08 (1.05-1.12) 0 (0-44) 2.51e-06
rs5911 chr17:42453065 ITGA2B All: C 105,041 14 C vs. A 0.333 (C) 0.358 (C) 1.08 (1.05-1.12) 0 (0-41) 2.69e-06
rs850733 chr17:42451305 ITGA2B All: C 105,041 14 G vs. A - - 0.92 (0.89-0.95) 0 (0-42) 3.00e-06
rs708382 chr17:42442344 FAM171A2 [+1101bp] All: C 105,041 14 C vs. T 0.375 (C) 0.358 (C) 1.08 (1.05-1.11) 0 (0-39) 3.07e-06
rs850737 chr17:42443784 FAM171A2 [+2541bp] All: C 103,437 13 C vs. T 0.375 (C) 0.358 (C) 1.08 (1.05-1.12) 0 (0-44) 3.41e-06
rs850738 chr17:42434630 FAM171A2 All: C 105,041 14 A vs. G - - 0.92 (0.89-0.96) 0 (0-39) 7.00e-06
rs5848 chr17:42430244 GRN All: C 105,041 14 T vs. C 0.192 (T) 0.225 (T) 1.10 (1.05-1.15) 0 (0-47) 9.24e-06
rs708383 chr17:42437754 FAM171A2 All: C 105,041 14 A vs. G 0.333 (A) 0.3 (A) 1.07 (1.04-1.11) 0 (0-39) 1.35e-05
rs708384 chr17:42437682 FAM171A2 All: C 105,041 14 A vs. C 0.333 (A) 0.292 (A) 1.07 (1.04-1.11) 0 (0-39) 1.42e-05
rs850731 chr17:42454270 ITGA2B All: C 108,990 15 T vs. C - 0.358 (C) 0.93 (0.90-0.97) 0 (0-46) 6.30e-05
rs78965384 chr17:42567121 GPATCH8 C - 11 T vs. C 0.025 (C) - <1 (-) 56 (-) <0.05
rs850734 chr17:42449025 ITGA2B [-523bp] C - 12 C vs. G 0.317 (G) 0.367 (G) <1 (-) 0 (-) <0.05
rs850730 chr17:42454463 ITGA2B C - 12 C vs. G 0.317 (C) 0.367 (C) >1 (-) 0 (-) <0.05
rs850736 chr17:42446420 ITGA2B [-3128bp] C - 12 C vs. G - - >1 (-) 0 (-) <0.05
rs113146332 chr17:42565977 GPATCH8 C - 10 C vs. G - - >1 (-) 52 (-) <0.05
rs76524030 chr17:42506135 GPATCH8 C - 12 A vs. G 0.05 (A) - >1 (-) 33 (-) <0.05
rs79759095 chr17:42528762 GPATCH8 C - 12 A vs. C 0.058 (C) 0.05 (C) <1 (-) 38 (-) <0.05
rs17543010 chr17:42487985 GPATCH8 C - 12 T vs. G 0.058 (G) 0.05 (G) <1 (-) 34 (-) <0.05
rs77542460 chr17:42555685 GPATCH8 C - 12 A vs. G 0.058 (G) - <1 (-) 40 (-) <0.05
rs77012009 chr17:42561329 GPATCH8 C - 12 T vs. C 0.058 (T) - >1 (-) 40 (-) <0.05
rs3744427 chr17:42476409 GPATCH8 C - 11 A vs. G 0.042 (A) 0.05 (A) >1 (-) 39 (-) <0.05
rs75563761 chr17:42559513 GPATCH8 C - 12 T vs. C 0.058 (T) 0.042 (T) >1 (-) 40 (-) <0.05
rs72824734 chr17:42423844 GRN C - 13 T vs. G 0.05 (G) - >1 (-) 0 (-) <0.05
rs59601921 chr17:42500412 GPATCH8 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs111281103 chr17:42593238 GPATCH8 [+12440bp] C - 11 A vs. G - - >1 (-) 44 (-) <0.05
rs146364320 chr17:42425114 GRN C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs78403836 chr17:42426206 GRN C - 13 C vs. G 0.058 (G) - >1 (-) 5 (-) <0.05
rs850735 chr17:42448180 ITGA2B [-1368bp] C - 12 A vs. G - - <1 (-) 0 (-) <0.05
rs850713 chr17:42427732 GRN C - 11 A vs. G 0.167 (A) 0.342 (A) >1 (-) 0 (-) <0.05
rs72824736 chr17:42428538 GRN C - 10 A vs. G 0.092 (A) - >1 (-) 0 (-) <0.05
rs9635715 chr17:42517354 GPATCH8 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs2879096 chr17:42423556 GRN C - 13 T vs. C 0.267 (T) 0.417 (C) >1 (-) 6 (-) >0.05
rs72824757 chr17:42550474 GPATCH8 C - 5 A vs. C 0.083 (C) 0.408 (C) >1 (-) 0 (-) >0.05
rs3785817 chr17:42423665 GRN C - 13 A vs. G 0.275 (G) 0.417 (A) <1 (-) 12 (-) >0.05
rs7223967 chr17:42460258 ITGA2B C - 12 A vs. C 0.033 (A) - <1 (-) 37 (-) >0.05
rs9890900 chr17:42460097 ITGA2B C - 12 T vs. C 0.033 (C) - >1 (-) 38 (-) >0.05
rs35941271 chr17:42436220 FAM171A2 C - 11 A vs. G 0.042 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs11658557 chr17:42494185 GPATCH8 C - 9 A vs. G 0.1 (A) 0.333 (A) <1 (-) 0 (-) >0.05
rs117986059 chr17:42523628 GPATCH8 C - 8 A vs. G - 0.017 (A) >1 (-) 0 (-) >0.05
rs117432945 chr17:42447569 ITGA2B [-1979bp] C - 12 T vs. C 0.033 (T) - <1 (-) 35 (-) >0.05
rs10514854 chr17:42513449 GPATCH8 C - 12 T vs. C 0.025 (C) - >1 (-) 41 (-) >0.05
rs72824741 chr17:42462106 ITGA2B C - 12 C vs. G 0.033 (C) - <1 (-) 39 (-) >0.05
rs75921220 chr17:42566705 GPATCH8 C - 11 T vs. C 0.042 (T) 0.042 (T) >1 (-) 31 (-) >0.05
rs62081228 chr17:42526135 GPATCH8 C - 12 T vs. C 0.025 (T) - <1 (-) 42 (-) >0.05
rs4793113 chr17:42580061 GPATCH8 C - 13 T vs. C 0.483 (T) 0.483 (T) >1 (-) 0 (-) >0.05
rs2045087 chr17:42482291 GPATCH8 C - 13 A vs. G 0.483 (G) 0.475 (G) <1 (-) 0 (-) >0.05
rs7216502 chr17:42589924 GPATCH8 [+9126bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7359702 chr17:42485713 GPATCH8 C - 12 T vs. C 0.042 (T) - <1 (-) 41 (-) >0.05

Association studies for this region [+]