GPATCH8, chr17:42472652-42580798 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs850732 chr17:42454243 ITGA2B All: C 105,041 14 C vs. T - - 0.92 (0.89-0.95) 0 (0-42) 2.33e-06
Meta_image?name=rs850732

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs116900702 chr17:42584638 GPATCH8 [+3840bp] C - 7 T vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs9890770 chr17:42615552 FZD2 [-19373bp] C - 12 A vs. G - - >1 (-) 7 (-) >0.05
rs35447133 chr17:42580004 GPATCH8 C - 10 T vs. C 0.042 (C) - <1 (-) 28 (-) >0.05
rs4113433 chr17:42627902 FZD2 [-7023bp] C - 13 T vs. G 0.25 (T) 0.083 (T) >1 (-) 13 (-) >0.05
rs7223926 chr17:42578882 GPATCH8 C - 12 A vs. G 0.383 (G) 0.433 (G) <1 (-) 11 (-) >0.05
rs147997011 chr17:42424174 GRN C - 9 A vs. G - - >1 (-) 18 (-) >0.05
rs12943380 chr17:42561291 GPATCH8 C - 10 C vs. G - - <1 (-) 28 (-) >0.05
rs140529521 chr17:42434655 FAM171A2 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs118164080 chr17:42519616 GPATCH8 C - 11 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs117538366 chr17:42542283 GPATCH8 C - 7 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs7223291 chr17:42519490 GPATCH8 C - 12 T vs. G - - <1 (-) 26 (-) >0.05
rs111568402 chr17:42439469 FAM171A2 C - 3 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs9303361 chr17:42516098 GPATCH8 C - 12 T vs. C 0.117 (T) 0.117 (T) <1 (-) 27 (-) >0.05
rs6503376 chr17:42606078 GPATCH8 [+25280bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs146143489 chr17:42426314 GRN C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs138050677 chr17:42548720 GPATCH8 C - 12 C vs. G - - <1 (-) 25 (-) >0.05
rs62078790 chr17:42616817 FZD2 [-18108bp] C - 13 A vs. G - - <1 (-) 35 (-) >0.05
rs3859268 chr17:42423263 GRN C - 13 T vs. C 0.35 (T) 0.117 (C) >1 (-) 26 (-) >0.05
rs4793101 chr17:42484001 GPATCH8 C - 13 T vs. C 0.417 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs4792938 chr17:42424599 GRN C - 13 C vs. G 0.367 (C) 0.075 (G) >1 (-) 27 (-) >0.05
rs7214894 chr17:42543705 GPATCH8 C - 12 T vs. C 0.392 (C) 0.433 (C) <1 (-) 5 (-) >0.05
rs13309195 chr17:42446955 ITGA2B [-2593bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs58923876 chr17:42471476 GPATCH8 [-1176bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs7211748 chr17:42508734 GPATCH8 C - 13 A vs. T - 0.433 (T) <1 (-) 0 (-) >0.05
rs12603993 chr17:42486973 GPATCH8 C - 13 T vs. C 0.417 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs13307434 chr17:42446937 ITGA2B [-2611bp] C - 11 C vs. G - - >1 (-) 0 (-) >0.05
rs4793109 chr17:42554214 GPATCH8 C - 13 A vs. C 0.425 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs79829646 chr17:42567453 GPATCH8 C - 3 T vs. C - - <1 (-) 47 (-) >0.05
rs4393612 chr17:42489366 GPATCH8 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12938868 chr17:42455717 ITGA2B C - 3 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs936018 chr17:42475962 GPATCH8 C - 6 A vs. C 0.025 (C) - >1 (-) 32 (-) >0.05
rs138718923 chr17:42552589 GPATCH8 C - 6 T vs. C - - <1 (-) 0 (-) >0.05
rs75704641 chr17:42624701 FZD2 [-10224bp] C - 9 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs76466681 chr17:42628323 FZD2 [-6602bp] C - 4 T vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs116598449 chr17:42626964 FZD2 [-7961bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs139857462 chr17:42565897 GPATCH8 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs8076164 chr17:42616315 FZD2 [-18610bp] C - 11 T vs. C 0.033 (C) 0.025 (C) <1 (-) 0 (-) >0.05
rs12386066 chr17:42506839 GPATCH8 C - 3 A vs. G - - <1 (-) 52 (-) >0.05
rs140690222 chr17:42629547 FZD2 [-5378bp] C - 8 T vs. C - - >1 (-) 5 (-) >0.05
rs35203463 chr17:42497433 GPATCH8 C - 8 C vs. G 0.025 (C) 0.117 (C) <1 (-) 7 (-) >0.05
rs9896335 chr17:42615342 FZD2 [-19583bp] C - 11 T vs. G 0.058 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs74831722 chr17:42614221 FZD2 [-20704bp] C - 11 T vs. C 0.058 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs12941086 chr17:42626662 FZD2 [-8263bp] C - 11 T vs. C 0.083 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs117480593 chr17:42442504 FAM171A2 [+1261bp] C - 11 A vs. G 0.008 (A) - >1 (-) 8 (-) >0.05
rs34719962 chr17:42520483 GPATCH8 C - 8 A vs. T 0.025 (A) 0.117 (A) <1 (-) 5 (-) >0.05
rs143649376 chr17:42450747 ITGA2B C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs9900840 chr17:42450066 ITGA2B C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs117994523 chr17:42497074 GPATCH8 C - 7 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs62081212 chr17:42468139 ITGA2B [+1266bp] C - 12 A vs. G 0.067 (A) - <1 (-) 25 (-) >0.05
rs34721364 chr17:42628735 FZD2 [-6190bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05

Association studies for this region [+]