HCAR1, chr12:123104824-123215390 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11059306 chr12:123152363 HCAR1 C - 12 T vs. G - - <1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7972728 chr12:123076778 KNTC1 C - 13 A vs. C - - >1 (-) 26 (-) >0.05
rs118091133 chr12:123200527 HCAR1 C - 13 T vs. C 0.45 (C) - >1 (-) 0 (-) >0.05
rs9705654 chr12:123083508 KNTC1 C - 13 T vs. C 0.242 (T) 0.142 (T) <1 (-) 25 (-) >0.05
rs1014188 chr12:123106893 KNTC1 C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs7316149 chr12:123063912 KNTC1 C - 13 A vs. G 0.25 (G) 0.167 (G) >1 (-) 26 (-) >0.05
rs77842044 chr12:123110393 KNTC1 C - 13 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs7314410 chr12:123075733 KNTC1 C - 13 A vs. G 0.075 (A) - <1 (-) 3 (-) >0.05
rs2264433 chr12:123179530 HCAR1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11837038 chr12:123102921 KNTC1 C - 13 T vs. G 0.075 (G) - >1 (-) 3 (-) >0.05
rs7980407 chr12:123056667 KNTC1 C - 13 A vs. G 0.083 (A) - <1 (-) 10 (-) >0.05
rs2062506 chr12:123084836 KNTC1 C - 13 A vs. G - - <1 (-) 26 (-) >0.05
rs74879342 chr12:123086796 KNTC1 C - 13 T vs. C 0.067 (C) - >1 (-) 1 (-) >0.05
rs75269781 chr12:123058260 KNTC1 C - 13 T vs. C 0.075 (T) - <1 (-) 7 (-) >0.05
rs2342082 chr12:123090380 KNTC1 C - 13 T vs. C - - <1 (-) 26 (-) >0.05
rs6489157 chr12:123101673 KNTC1 C - 13 C vs. G 0.242 (G) 0.15 (G) >1 (-) 25 (-) >0.05
rs6489156 chr12:123100397 KNTC1 C - 13 T vs. C 0.242 (C) 0.15 (C) >1 (-) 25 (-) >0.05
rs75783835 chr12:123056593 KNTC1 C - 13 A vs. G 0.075 (G) - >1 (-) 8 (-) >0.05
rs2173628 chr12:123097023 KNTC1 C - 13 A vs. G - - >1 (-) 28 (-) >0.05
rs148880360 chr12:123079670 KNTC1 C - 13 T vs. G - - <1 (-) 3 (-) >0.05
rs74892415 chr12:123080084 KNTC1 C - 13 A vs. G 0.075 (A) - <1 (-) 3 (-) >0.05
rs496911 chr12:123216469 HCAR1 [+1079bp] C - 12 A vs. G 0.475 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs1392236 chr12:123074890 KNTC1 C - 13 C vs. G 0.242 (C) 0.15 (C) <1 (-) 26 (-) >0.05
rs7307735 chr12:123087442 KNTC1 C - 13 A vs. G 0.242 (A) 0.15 (A) <1 (-) 23 (-) >0.05
rs34623699 chr12:123220416 HCAR1 [+5026bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs644626 chr12:123167138 HCAR1 C - 13 T vs. C 0.367 (T) 0.392 (T) >1 (-) 0 (-) >0.05
rs6489159 chr12:123112806 HCAR1 C - 13 A vs. G 0.233 (G) 0.058 (G) >1 (-) 28 (-) >0.05
rs7966094 chr12:123115771 HCAR1 C - 13 A vs. G 0.258 (A) - <1 (-) 27 (-) >0.05
rs7295397 chr12:123116209 HCAR1 C - 13 T vs. C 0.242 (C) 0.15 (C) >1 (-) 27 (-) >0.05
rs151296925 chr12:123065499 KNTC1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs143575566 chr12:123088193 KNTC1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7397990 chr12:123119472 HCAR1 C - 13 T vs. C 0.25 (T) 0.15 (T) <1 (-) 27 (-) >0.05
rs7316734 chr12:123117425 HCAR1 C - 13 A vs. G 0.258 (A) - <1 (-) 26 (-) >0.05
rs3803005 chr12:123110654 KNTC1 C - 13 T vs. C 0.258 (T) 0.158 (T) <1 (-) 26 (-) >0.05
rs75615229 chr12:123067937 KNTC1 C - 13 A vs. C 0.075 (A) - <1 (-) 18 (-) >0.05
rs7309140 chr12:123109673 KNTC1 C - 13 T vs. C 0.067 (C) - >1 (-) 3 (-) >0.05
rs3858543 chr12:123203360 HCAR1 C - 13 T vs. C 0.3 (T) 0.275 (T) >1 (-) 0 (-) >0.05
rs141556355 chr12:123116172 HCAR1 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs7309390 chr12:123110422 KNTC1 C - 12 A vs. G 0.242 (A) 0.15 (A) <1 (-) 30 (-) >0.05
rs2649896 chr12:123238797 DENR All: C 105,041 14 A vs. G 0.1 (A) - 0.94 (0.88-1.01) 0 (-) 0.108
rs73224188 chr12:123140411 HCAR1 C - 13 A vs. G 0.458 (A) 0.392 (A) <1 (-) 29 (-) >0.05
rs645348 chr12:123140597 HCAR1 C - 13 A vs. G - - >1 (-) 29 (-) >0.05
rs2936731 chr12:123144580 HCAR1 C - 13 T vs. G - - <1 (-) 27 (-) >0.05
rs35297311 chr12:123131578 HCAR1 C - 13 A vs. C 0.458 (C) 0.392 (C) >1 (-) 25 (-) >0.05
rs612465 chr12:123144441 HCAR1 C - 13 C vs. G 0.458 (C) 0.392 (C) <1 (-) 27 (-) >0.05
rs36117464 chr12:123070218 KNTC1 C - 13 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs1260121 chr12:123246355 DENR All: C 108,990 15 G vs. A 0.1 (G) 0.008 (G) 0.95 (0.88-1.01) 0 (-) 0.113
rs2656812 chr12:123244984 DENR All: C 108,990 15 C vs. A 0.092 (C) 0.008 (C) 0.95 (0.88-1.01) 0 (-) 0.113
rs662889 chr12:123188079 HCAR1 C - 12 A vs. G 0.067 (A) 0.4 (A) >1 (-) 5 (-) >0.05
rs545234 chr12:123188076 HCAR1 C - 12 T vs. G 0.083 (T) 0.392 (T) >1 (-) 5 (-) >0.05
rs35157148 chr12:123131651 HCAR1 C - 13 T vs. C 0.458 (T) 0.392 (T) <1 (-) 25 (-) >0.05

Association studies for this region [+]