KNTC1, chr12:123011793-123110943 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11059306 chr12:123152363 HCAR1 C - 12 T vs. G - - <1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11059306 chr12:123152363 HCAR1 C - 12 T vs. G - - <1 (-) 0 (-) <1.00e-04
rs113480808 chr12:123124138 HCAR1 C - 12 T vs. C - - <1 (-) 10 (-) <1.00e-04
rs6489190 chr12:123153825 HCAR1 C - 12 T vs. C 0.208 (T) 0.35 (T) >1 (-) 2 (-) <1.00e-04
rs9788287 chr12:123155263 HCAR1 C - 10 A vs. G 0.092 (A) - >1 (-) 23 (-) <1.00e-04
rs4237789 chr12:122988800 RSRC2 [-390bp] C - 13 T vs. C 0.242 (T) 0.467 (C) >1 (-) 0 (-) <1.00e-04
rs73409839 chr12:123116355 HCAR1 C - 13 A vs. G - - >1 (-) 0 (-) <1.00e-04
rs11059120 chr12:123129304 HCAR1 C - 13 T vs. C - - >1 (-) 0 (-) <1.00e-04
rs11059214 chr12:123135240 HCAR1 C - 13 T vs. G - - >1 (-) 0 (-) <1.00e-04
rs11059023 chr12:123108563 KNTC1 C - 13 T vs. C - - >1 (-) 0 (-) <1.00e-04
rs34773022 chr12:123123414 HCAR1 C - 13 A vs. G 0.25 (A) 0.442 (A) >1 (-) 0 (-) <1.00e-04
rs34031587 chr12:123119707 HCAR1 C - 13 T vs. C 0.225 (T) 0.458 (T) >1 (-) 0 (-) <1.00e-04
rs35685258 chr12:123110453 KNTC1 C - 13 A vs. G 0.242 (A) 0.467 (A) >1 (-) 0 (-) <1.00e-04
rs2270775 chr12:123105143 KNTC1 C - 13 T vs. C 0.25 (T) 0.467 (T) >1 (-) 0 (-) <0.05
rs11059008 chr12:123103893 KNTC1 C - 13 A vs. G 0.25 (G) 0.467 (G) <1 (-) 0 (-) <0.05
rs11059028 chr12:123108990 KNTC1 C - 13 T vs. C 0.25 (C) 0.475 (C) <1 (-) 0 (-) <0.05
rs61954998 chr12:123116854 HCAR1 C - 13 T vs. C 0.233 (C) - <1 (-) 0 (-) <0.05
rs66893471 chr12:123098858 KNTC1 C - 13 T vs. C 0.25 (C) 0.467 (C) <1 (-) 0 (-) <0.05
rs7954964 chr12:123091759 KNTC1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs11058607 chr12:123018762 KNTC1 C - 13 A vs. G 0.242 (G) 0.467 (G) <1 (-) 0 (-) <0.05
rs57721222 chr12:123088351 KNTC1 C - 13 A vs. G 0.25 (G) 0.458 (G) <1 (-) 0 (-) <0.05
rs35825023 chr12:123088756 KNTC1 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs7485035 chr12:123019935 KNTC1 C - 13 T vs. C 0.242 (T) 0.475 (T) >1 (-) 0 (-) <0.05
rs1392237 chr12:123095041 KNTC1 C - 13 T vs. C 0.25 (C) 0.467 (C) <1 (-) 0 (-) <0.05
rs7977922 chr12:123020823 KNTC1 C - 13 A vs. G 0.25 (A) 0.458 (A) >1 (-) 0 (-) <0.05
rs7979860 chr12:123093541 KNTC1 C - 13 T vs. G 0.25 (T) 0.467 (T) >1 (-) 0 (-) <0.05
rs7976597 chr12:123027811 KNTC1 C - 13 T vs. C 0.25 (C) 0.467 (C) <1 (-) 0 (-) <0.05
rs11058868 chr12:123079766 KNTC1 C - 13 A vs. C 0.25 (A) 0.467 (A) >1 (-) 0 (-) <0.05
rs78525750 chr12:123001692 RSRC2 C - 13 A vs. G 0.092 (G) - <1 (-) 0 (-) <0.05
rs7296826 chr12:123112356 HCAR1 C - 13 A vs. G - 0.442 (A) >1 (-) 0 (-) <0.05
rs35139892 chr12:123034022 KNTC1 C - 13 A vs. C 0.25 (A) - >1 (-) 0 (-) <0.05
rs61956132 chr12:123040382 KNTC1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs11058796 chr12:123062489 KNTC1 C - 13 A vs. G 0.25 (G) 0.467 (G) <1 (-) 0 (-) <0.05
rs36008586 chr12:123038045 KNTC1 C - 13 T vs. C 0.25 (T) 0.467 (T) >1 (-) 0 (-) <0.05
rs12230600 chr12:123041071 KNTC1 C - 13 T vs. C 0.25 (C) 0.467 (C) <1 (-) 0 (-) <0.05
rs11058812 chr12:123065993 KNTC1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs12829891 chr12:123071071 KNTC1 C - 13 T vs. C 0.242 (C) 0.475 (C) <1 (-) 0 (-) <0.05
rs12819165 chr12:123034976 KNTC1 C - 13 A vs. G 0.25 (G) 0.467 (G) <1 (-) 0 (-) <0.05
rs12827322 chr12:123037308 KNTC1 C - 13 T vs. C 0.25 (C) 0.467 (C) <1 (-) 0 (-) <0.05
rs61956128 chr12:123028096 KNTC1 C - 13 T vs. C 0.25 (C) 0.442 (C) <1 (-) 0 (-) <0.05
rs10847227 chr12:123066685 KNTC1 C - 13 T vs. C 0.25 (T) 0.467 (T) >1 (-) 0 (-) <0.05
rs10744294 chr12:123097528 KNTC1 C - 13 A vs. C 0.25 (A) 0.467 (A) >1 (-) 0 (-) <0.05
rs11058772 chr12:123051021 KNTC1 C - 13 A vs. T - - <1 (-) 0 (-) <0.05
rs11058649 chr12:123029865 KNTC1 C - 13 T vs. C 0.25 (T) 0.467 (T) >1 (-) 0 (-) <0.05
rs61453559 chr12:123000055 RSRC2 C - 13 T vs. C 0.217 (C) 0.433 (C) <1 (-) 4 (-) <0.05
rs11058575 chr12:123006408 RSRC2 C - 13 T vs. C 0.208 (T) - >1 (-) 5 (-) <0.05
rs10847103 chr12:123003278 RSRC2 C - 13 T vs. C 0.208 (T) 0.417 (T) >1 (-) 3 (-) <0.05
rs11058480 chr12:122991279 RSRC2 C - 13 T vs. C 0.208 (T) 0.433 (T) >1 (-) 2 (-) <0.05
rs112206622 chr12:122962286 ZCCHC8 C - 13 A vs. G - - >1 (-) 2 (-) <0.05
rs12426619 chr12:122980162 ZCCHC8 C - 13 T vs. C - - >1 (-) 5 (-) <0.05
rs11058904 chr12:123085754 KNTC1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.