HCAR1, chr12:123104824-123215390 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11059306 chr12:123152363 HCAR1 C - 12 T vs. G - - <1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs839356 chr12:123251637 DENR All: C 108,990 15 C vs. A 0.092 (C) 0.017 (C) 0.95 (0.89-1.01) 0 (-) 0.117
rs582856 chr12:123186458 HCAR1 C - 12 T vs. C 0.108 (C) 0.325 (C) <1 (-) 0 (-) >0.05
rs74459683 chr12:123096614 KNTC1 C - 13 T vs. G 0.075 (G) - >1 (-) 0 (-) >0.05
rs61955030 chr12:123197906 HCAR1 C - 8 T vs. G - - <1 (-) 0 (-) >0.05
rs4759370 chr12:123152216 HCAR1 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs61954974 chr12:123074169 KNTC1 C - 13 T vs. C 0.283 (T) 0.167 (T) <1 (-) 20 (-) >0.05
rs34357107 chr12:123139084 HCAR1 C - 13 T vs. G - - >1 (-) 34 (-) >0.05
rs2245199 chr12:123145864 HCAR1 C - 13 T vs. C 0.458 (T) 0.392 (T) <1 (-) 25 (-) >0.05
rs61955000 chr12:123121365 HCAR1 C - 13 A vs. G - - >1 (-) 28 (-) >0.05
rs117269855 chr12:123118476 HCAR1 C - 8 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs11059100 chr12:123124702 HCAR1 C - 13 A vs. G 0.458 (A) 0.442 (G) <1 (-) 28 (-) >0.05
rs10847335 chr12:123123258 HCAR1 C - 13 A vs. C 0.45 (C) 0.4 (C) >1 (-) 28 (-) >0.05
rs73224116 chr12:123126288 HCAR1 C - 13 C vs. G - - >1 (-) 28 (-) >0.05
rs35296629 chr12:123144307 HCAR1 C - 12 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs7397194 chr12:123132255 HCAR1 C - 13 C vs. G 0.458 (G) 0.392 (G) >1 (-) 30 (-) >0.05
rs7134265 chr12:123130591 HCAR1 C - 13 A vs. G - - >1 (-) 30 (-) >0.05
rs34371863 chr12:123155683 HCAR1 C - 10 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs11059237 chr12:123137794 HCAR1 C - 13 A vs. G 0.458 (G) 0.392 (G) >1 (-) 31 (-) >0.05
rs7398147 chr12:123134731 HCAR1 C - 13 T vs. C - - <1 (-) 31 (-) >0.05
rs6489179 chr12:123136244 HCAR1 C - 13 A vs. C 0.458 (C) 0.367 (C) >1 (-) 30 (-) >0.05
rs147522256 chr12:123148936 HCAR1 C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs9795701 chr12:123125897 HCAR1 C - 13 T vs. C 0.425 (C) 0.342 (C) >1 (-) 28 (-) >0.05
rs61954972 chr12:123074167 KNTC1 C - 13 T vs. G 0.267 (T) 0.142 (T) <1 (-) 20 (-) >0.05
rs34023619 chr12:123100188 KNTC1 C - 13 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs525017 chr12:123215734 HCAR1 [+344bp] C - 9 T vs. C 0.092 (T) 0.083 (T) >1 (-) 0 (-) >0.05
rs36103570 chr12:123110230 KNTC1 C - 13 T vs. C 0.042 (C) - <1 (-) 0 (-) >0.05
rs75751153 chr12:123198014 HCAR1 C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs527902 chr12:123215410 HCAR1 [+20bp] C - 9 T vs. C 0.083 (T) 0.1 (T) >1 (-) 0 (-) >0.05
rs61954973 chr12:123074168 KNTC1 C - 13 T vs. C 0.275 (T) 0.158 (T) <1 (-) 20 (-) >0.05
rs7307887 chr12:123151953 HCAR1 C - 12 T vs. C 0.25 (C) 0.35 (C) <1 (-) 37 (-) >0.05
rs582927 chr12:123155443 HCAR1 C - 10 C vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs2649914 chr12:123257352 CCDC62 [-1522bp] C - 13 A vs. G 0.1 (A) 0.0 (A) <1 (-) 0 (-) >0.05
rs56060411 chr12:123148060 HCAR1 C - 11 A vs. G - - <1 (-) 11 (-) >0.05
rs6489191 chr12:123154039 HCAR1 C - 12 A vs. G 0.458 (A) 0.242 (A) <1 (-) 44 (-) >0.05
rs34263900 chr12:123066369 KNTC1 C - 11 A vs. T 0.042 (A) - >1 (-) 0 (-) >0.05
rs112003348 chr12:123175533 HCAR1 C - 9 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs839355 chr12:123260285 CCDC62 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs513567 chr12:123213236 HCAR1 C - 9 A vs. G 0.142 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs117294549 chr12:123091267 KNTC1 C - 4 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs1696348 chr12:123211817 HCAR1 C - 9 A vs. G 0.1 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs487782 chr12:123198005 HCAR1 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs61955025 chr12:123184465 HCAR1 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs1975761 chr12:123254699 DENR C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs10466883 chr12:123229106 DENR [-8215bp] C - 13 T vs. G - - >1 (-) 8 (-) >0.05
rs10466884 chr12:123231606 DENR [-5715bp] C - 13 A vs. G - - >1 (-) 8 (-) >0.05
rs11059711 chr12:123233892 DENR [-3429bp] C - 13 A vs. G 0.05 (A) 0.325 (A) >1 (-) 8 (-) >0.05
rs7966971 chr12:123225826 HCAR1 [+10436bp] C - 13 C vs. G - - >1 (-) 7 (-) >0.05
rs150362789 chr12:123199392 HCAR1 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs2936772 chr12:123199394 HCAR1 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs1798218 chr12:123183091 HCAR1 C - 13 A vs. G - - >1 (-) 5 (-) >0.05

Association studies for this region [+]