HLA-C, chr6:31236526-31239907 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2853923 chr6:31265737 HLA-C [+25830bp] All: C 103,235 14 A vs. G 0.492 (A) 0.442 (A) 1.07 (1.04-1.11) 0 (0-47) 9.90e-06
Meta_image?name=rs2853923

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35672615 chr6:31274890 HLA-C [+34983bp] C - 11 T vs. G - - <1 (-) 9 (-) >0.05
rs6932070 chr6:31198896 HCG27 [+27151bp] C - 12 T vs. C 0.175 (C) 0.233 (C) >1 (-) 28 (-) >0.05
rs2524113 chr6:31231692 HLA-C [-4834bp] C - 7 T vs. G - - >1 (-) 21 (-) >0.05
rs6908994 chr6:31198709 HCG27 [+26964bp] C - 12 T vs. C 0.175 (T) 0.233 (T) <1 (-) 28 (-) >0.05
rs11967243 chr6:31246266 HLA-C [+6359bp] C - 12 T vs. C 0.125 (T) 0.258 (T) <1 (-) 18 (-) >0.05
rs114183633 chr6:31241241 HLA-C [+1334bp] C - 11 T vs. C 0.033 (T) 0.025 (T) >1 (-) 38 (-) >0.05
rs3132513 chr6:31203570 HCG27 [+31825bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs116713535 chr6:31241495 HLA-C [+1588bp] C - 11 A vs. G - 0.042 (A) >1 (-) 38 (-) >0.05
rs35624930 chr6:31272251 HLA-C [+32344bp] C - 11 T vs. C 0.125 (C) 0.167 (C) >1 (-) 7 (-) >0.05
rs12111032 chr6:31242191 HLA-C [+2284bp] C - 12 A vs. G 0.225 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs7454487 chr6:31240776 HLA-C [+869bp] C - 11 A vs. G - - <1 (-) 37 (-) >0.05
rs2844621 chr6:31241537 HLA-C [+1630bp] C - 12 T vs. C 0.367 (C) 0.292 (C) <1 (-) 47 (-) >0.05
rs2524112 chr6:31231780 HLA-C [-4746bp] C - 7 A vs. G 0.358 (G) 0.175 (G) >1 (-) 23 (-) >0.05
rs115849073 chr6:31268641 HLA-C [+28734bp] C - 12 T vs. C 0.033 (T) 0.1 (T) >1 (-) 14 (-) >0.05
rs74751264 chr6:31271512 HLA-C [+31605bp] C - 10 T vs. C 0.025 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs2853916 chr6:31275246 HLA-C [+35339bp] C - 12 A vs. G 0.183 (A) 0.333 (A) <1 (-) 6 (-) >0.05
rs2523609 chr6:31237255 HLA-C C - 3 A vs. G 0.425 (G) 0.25 (G) <1 (-) 15 (-) >0.05
rs115872263 chr6:31210070 HLA-C [-26456bp] C - 6 T vs. C - - <1 (-) 0 (-) >0.05
rs2844622 chr6:31240060 HLA-C [+153bp] C - 10 A vs. G 0.392 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs17192407 chr6:31256519 HLA-C [+16612bp] C - 12 A vs. G 0.033 (G) 0.1 (G) <1 (-) 25 (-) >0.05
rs16899168 chr6:31258687 HLA-C [+18780bp] C - 12 A vs. G 0.033 (A) 0.125 (A) >1 (-) 21 (-) >0.05
rs2524062 chr6:31248204 HLA-C [+8297bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs34928629 chr6:31251079 HLA-C [+11172bp] C - 12 T vs. G - 0.1 (T) >1 (-) 23 (-) >0.05
rs34626842 chr6:31251161 HLA-C [+11254bp] C - 12 T vs. C 0.033 (T) 0.083 (T) >1 (-) 23 (-) >0.05
rs9264941 chr6:31274298 HLA-C [+34391bp] C - 11 A vs. G 0.175 (A) 0.1 (A) >1 (-) 19 (-) >0.05
rs114115450 chr6:31252388 HLA-C [+12481bp] C - 12 A vs. G 0.025 (A) 0.075 (A) >1 (-) 23 (-) >0.05
rs115862431 chr6:31252521 HLA-C [+12614bp] C - 12 T vs. C 0.033 (T) 0.092 (T) >1 (-) 23 (-) >0.05
rs7454567 chr6:31240826 HLA-C [+919bp] C - 11 A vs. G 0.033 (A) - >1 (-) 38 (-) >0.05
rs12662550 chr6:31215732 HLA-C [-20794bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs28397295 chr6:31205096 HLA-C [-31430bp] C - 12 A vs. T 0.175 (A) 0.233 (A) <1 (-) 27 (-) >0.05
rs114198295 chr6:31253667 HLA-C [+13760bp] C - 12 A vs. G 0.033 (G) 0.092 (G) <1 (-) 23 (-) >0.05
rs116781109 chr6:31215112 HLA-C [-21414bp] C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs115370806 chr6:31253659 HLA-C [+13752bp] C - 12 T vs. C 0.033 (C) 0.108 (C) <1 (-) 23 (-) >0.05
rs7745050 chr6:31203759 HCG27 [+32014bp] C - 12 A vs. C 0.175 (C) - >1 (-) 1 (-) >0.05
rs114214374 chr6:31254015 HLA-C [+14108bp] C - 12 A vs. G 0.025 (A) 0.108 (A) >1 (-) 23 (-) >0.05
rs55691061 chr6:31254604 HLA-C [+14697bp] C - 12 T vs. C 0.033 (T) 0.108 (T) >1 (-) 23 (-) >0.05
rs59224028 chr6:31254353 HLA-C [+14446bp] C - 12 A vs. G 0.025 (A) 0.1 (A) >1 (-) 23 (-) >0.05
rs55994500 chr6:31256050 HLA-C [+16143bp] C - 12 A vs. G - 0.1 (A) >1 (-) 23 (-) >0.05
rs2524168 chr6:31275163 HLA-C [+35256bp] C - 12 T vs. C 0.217 (C) 0.333 (C) >1 (-) 13 (-) >0.05
rs17192428 chr6:31256697 HLA-C [+16790bp] C - 12 T vs. C 0.033 (T) 0.117 (T) >1 (-) 23 (-) >0.05
rs2524092 chr6:31240216 HLA-C [+309bp] C - 10 A vs. C 0.383 (A) 0.233 (A) >1 (-) 0 (-) >0.05
rs396243 chr6:31275174 HLA-C [+35267bp] C - 12 T vs. C 0.217 (C) 0.342 (C) >1 (-) 13 (-) >0.05
rs115739713 chr6:31267461 HLA-C [+27554bp] C - 12 T vs. C 0.033 (C) 0.1 (C) <1 (-) 15 (-) >0.05
rs9264545 chr6:31234681 HLA-C [-1845bp] C - 5 T vs. C 0.467 (T) 0.408 (T) >1 (-) 0 (-) >0.05
rs115482903 chr6:31257198 HLA-C [+17291bp] C - 12 A vs. G 0.067 (A) 0.083 (A) >1 (-) 23 (-) >0.05
rs114198603 chr6:31257231 HLA-C [+17324bp] C - 12 A vs. C - 0.1 (C) <1 (-) 23 (-) >0.05
rs115466387 chr6:31257495 HLA-C [+17588bp] C - 12 C vs. G 0.033 (G) 0.108 (G) <1 (-) 23 (-) >0.05
rs114526113 chr6:31257285 HLA-C [+17378bp] C - 12 T vs. C - 0.108 (C) <1 (-) 23 (-) >0.05
rs2394888 chr6:31202246 HCG27 [+30501bp] C - 12 A vs. G 0.333 (A) 0.192 (A) >1 (-) 48 (-) >0.05
rs114338776 chr6:31257795 HLA-C [+17888bp] C - 12 A vs. G 0.033 (G) 0.1 (G) <1 (-) 23 (-) >0.05

Association studies for this region [+]