HLA-C, chr6:31236526-31239907 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2853923 chr6:31265737 HLA-C [+25830bp] All: C 103,235 14 A vs. G 0.492 (A) 0.442 (A) 1.07 (1.04-1.11) 0 (0-47) 9.90e-06
Meta_image?name=rs2853923

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs116350468 chr6:31252951 HLA-C [+13044bp] C - 12 T vs. G 0.067 (T) 0.125 (T) >1 (-) 24 (-) >0.05
rs151009264 chr6:31247494 HLA-C [+7587bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs6930660 chr6:31270639 HLA-C [+30732bp] C - 12 T vs. G 0.075 (G) 0.158 (G) <1 (-) 23 (-) >0.05
rs114206206 chr6:31253468 HLA-C [+13561bp] C - 12 T vs. G 0.05 (T) 0.1 (T) >1 (-) 24 (-) >0.05
rs55822325 chr6:31254691 HLA-C [+14784bp] C - 12 A vs. G 0.067 (G) 0.1 (G) <1 (-) 24 (-) >0.05
rs72861465 chr6:31255344 HLA-C [+15437bp] C - 12 A vs. G 0.033 (A) 0.158 (A) <1 (-) 12 (-) >0.05
rs7451915 chr6:31247356 HLA-C [+7449bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs79738939 chr6:31249417 HLA-C [+9510bp] C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs1111462 chr6:31270084 HLA-C [+30177bp] C - 12 A vs. G 0.283 (G) 0.358 (G) <1 (-) 24 (-) >0.05
rs2524106 chr6:31232824 HLA-C [-3702bp] C - 4 A vs. G 0.2 (A) 0.208 (A) >1 (-) 0 (-) >0.05
rs58022700 chr6:31254334 HLA-C [+14427bp] C - 12 T vs. C 0.067 (T) 0.117 (T) >1 (-) 24 (-) >0.05
rs58410461 chr6:31254299 HLA-C [+14392bp] C - 12 A vs. C 0.067 (C) 0.117 (C) <1 (-) 24 (-) >0.05
rs56328367 chr6:31254594 HLA-C [+14687bp] C - 12 T vs. C 0.067 (C) 0.108 (C) <1 (-) 24 (-) >0.05
rs35298376 chr6:31260040 HLA-C [+20133bp] C - 12 T vs. G 0.067 (G) 0.108 (G) <1 (-) 26 (-) >0.05
rs35389342 chr6:31260049 HLA-C [+20142bp] C - 12 T vs. C 0.067 (C) 0.1 (C) <1 (-) 26 (-) >0.05
rs57599285 chr6:31255183 HLA-C [+15276bp] C - 12 T vs. C 0.067 (T) 0.117 (T) >1 (-) 24 (-) >0.05
rs114598080 chr6:31255442 HLA-C [+15535bp] C - 12 A vs. G 0.067 (A) 0.117 (A) >1 (-) 24 (-) >0.05
rs9394053 chr6:31265375 HLA-C [+25468bp] C - 12 A vs. G - 0.158 (A) <1 (-) 0 (-) >0.05
rs58860177 chr6:31254485 HLA-C [+14578bp] C - 12 T vs. C 0.067 (C) 0.117 (C) <1 (-) 24 (-) >0.05
rs55825863 chr6:31255465 HLA-C [+15558bp] C - 12 A vs. C 0.067 (A) 0.117 (A) >1 (-) 24 (-) >0.05
rs56184612 chr6:31255523 HLA-C [+15616bp] C - 12 A vs. G 0.067 (G) 0.117 (G) <1 (-) 24 (-) >0.05
rs114164395 chr6:31242329 HLA-C [+2422bp] C - 6 A vs. G 0.017 (G) 0.008 (G) >1 (-) 48 (-) >0.05
rs55918251 chr6:31255811 HLA-C [+15904bp] C - 12 A vs. G 0.067 (G) 0.117 (G) <1 (-) 24 (-) >0.05
rs17192421 chr6:31256693 HLA-C [+16786bp] C - 12 T vs. C 0.067 (C) 0.117 (C) <1 (-) 24 (-) >0.05
rs1634792 chr6:31276751 HLA-C [+36844bp] C - 12 A vs. C 0.158 (C) - >1 (-) 0 (-) >0.05
rs3132482 chr6:31243420 HLA-C [+3513bp] C - 12 A vs. G 0.358 (G) 0.383 (A) <1 (-) 41 (-) >0.05
rs17198783 chr6:31256746 HLA-C [+16839bp] C - 12 T vs. C 0.067 (C) 0.117 (C) <1 (-) 25 (-) >0.05
rs114015300 chr6:31256965 HLA-C [+17058bp] C - 12 A vs. C 0.075 (A) 0.117 (A) >1 (-) 25 (-) >0.05
rs115007911 chr6:31256982 HLA-C [+17075bp] C - 12 A vs. C 0.067 (A) 0.108 (A) >1 (-) 25 (-) >0.05
rs115106318 chr6:31259704 HLA-C [+19797bp] C - 12 A vs. G 0.067 (G) 0.125 (G) <1 (-) 25 (-) >0.05
rs116736925 chr6:31257229 HLA-C [+17322bp] C - 12 A vs. G 0.067 (A) 0.092 (A) >1 (-) 25 (-) >0.05
rs9468926 chr6:31260218 HLA-C [+20311bp] C - 12 T vs. C 0.325 (T) 0.367 (T) <1 (-) 21 (-) >0.05
rs77985136 chr6:31245931 HLA-C [+6024bp] C - 12 A vs. T 0.1 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs9468922 chr6:31255286 HLA-C [+15379bp] C - 12 A vs. G 0.325 (A) 0.35 (A) <1 (-) 21 (-) >0.05
rs116337797 chr6:31257422 HLA-C [+17515bp] C - 12 A vs. G 0.067 (A) 0.108 (A) >1 (-) 25 (-) >0.05
rs17198776 chr6:31256732 HLA-C [+16825bp] C - 12 T vs. C 0.067 (T) 0.117 (T) >1 (-) 25 (-) >0.05
rs115651636 chr6:31257533 HLA-C [+17626bp] C - 12 T vs. C 0.067 (C) 0.117 (C) <1 (-) 25 (-) >0.05
rs115504545 chr6:31257251 HLA-C [+17344bp] C - 12 A vs. G 0.033 (G) 0.108 (G) <1 (-) 25 (-) >0.05
rs115545796 chr6:31258036 HLA-C [+18129bp] C - 12 A vs. C 0.067 (C) 0.108 (C) <1 (-) 25 (-) >0.05
rs116030808 chr6:31259495 HLA-C [+19588bp] C - 12 A vs. G 0.058 (G) 0.117 (G) <1 (-) 26 (-) >0.05
rs148583005 chr6:31231911 HLA-C [-4615bp] C - 4 A vs. T - - <1 (-) 0 (-) >0.05
rs78950083 chr6:31258986 HLA-C [+19079bp] C - 12 T vs. C 0.058 (C) 0.083 (C) <1 (-) 29 (-) >0.05
rs16899170 chr6:31259017 HLA-C [+19110bp] C - 12 T vs. C 0.067 (C) 0.092 (C) <1 (-) 24 (-) >0.05
rs114454776 chr6:31259605 HLA-C [+19698bp] C - 12 A vs. G 0.067 (A) 0.075 (A) >1 (-) 25 (-) >0.05
rs35401506 chr6:31259332 HLA-C [+19425bp] C - 12 T vs. C 0.058 (C) 0.117 (C) <1 (-) 25 (-) >0.05
rs36060788 chr6:31259338 HLA-C [+19431bp] C - 12 A vs. G 0.058 (G) 0.125 (G) <1 (-) 25 (-) >0.05
rs72855946 chr6:31246100 HLA-C [+6193bp] C - 12 A vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs57742463 chr6:31255210 HLA-C [+15303bp] C - 12 A vs. C 0.067 (A) 0.117 (A) >1 (-) 24 (-) >0.05
rs66689394 chr6:31246095 HLA-C [+6188bp] C - 12 T vs. C 0.092 (C) 0.1 (C) >1 (-) 0 (-) >0.05
rs1634757 chr6:31276610 HLA-C [+36703bp] C - 12 T vs. C 0.15 (T) - <1 (-) 0 (-) >0.05

Association studies for this region [+]