HLA-C, chr6:31236526-31239907 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2853923 chr6:31265737 HLA-C [+25830bp] All: C 103,235 14 A vs. G 0.492 (A) 0.442 (A) 1.07 (1.04-1.11) 0 (0-47) 9.90e-06
Meta_image?name=rs2853923

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34925694 chr6:31259955 HLA-C [+20048bp] C - 12 A vs. G 0.067 (G) 0.108 (G) <1 (-) 25 (-) >0.05
rs148627636 chr6:31247340 HLA-C [+7433bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs28367595 chr6:31259387 HLA-C [+19480bp] C - 12 A vs. G 0.325 (A) 0.35 (A) <1 (-) 20 (-) >0.05
rs114601215 chr6:31260462 HLA-C [+20555bp] C - 12 C vs. G 0.067 (G) 0.108 (G) <1 (-) 25 (-) >0.05
rs55993314 chr6:31261056 HLA-C [+21149bp] C - 12 T vs. C 0.067 (T) 0.092 (T) >1 (-) 25 (-) >0.05
rs116553115 chr6:31244961 HLA-C [+5054bp] C - 12 A vs. G 0.1 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs16899178 chr6:31261137 HLA-C [+21230bp] C - 12 T vs. C 0.058 (T) 0.117 (T) >1 (-) 25 (-) >0.05
rs9264804 chr6:31270530 HLA-C [+30623bp] C - 12 A vs. G 0.217 (G) 0.258 (G) <1 (-) 35 (-) >0.05
rs6924177 chr6:31248313 HLA-C [+8406bp] C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs34768537 chr6:31261570 HLA-C [+21663bp] C - 12 T vs. G - - <1 (-) 25 (-) >0.05
rs116134275 chr6:31261571 HLA-C [+21664bp] C - 12 T vs. C 0.058 (C) 0.117 (C) <1 (-) 25 (-) >0.05
rs6927461 chr6:31201803 HCG27 [+30058bp] C - 12 C vs. G 0.258 (C) 0.475 (C) >1 (-) 54 (-) >0.05
rs9380236 chr6:31254664 HLA-C [+14757bp] C - 12 A vs. G 0.033 (G) 0.158 (G) >1 (-) 15 (-) >0.05
rs4084262 chr6:31218889 HLA-C [-17637bp] C - 8 T vs. C 0.158 (T) 0.05 (T) >1 (-) 3 (-) >0.05
rs112161056 chr6:31246632 HLA-C [+6725bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs1634788 chr6:31277686 HLA-C [+37779bp] C - 12 A vs. T 0.158 (A) - <1 (-) 0 (-) >0.05
rs1634755 chr6:31277170 HLA-C [+37263bp] C - 12 T vs. C 0.167 (T) - <1 (-) 0 (-) >0.05
rs55651925 chr6:31218131 HLA-C [-18395bp] C - 8 C vs. G 0.158 (C) 0.042 (C) >1 (-) 1 (-) >0.05
rs9461685 chr6:31265355 HLA-C [+25448bp] C - 9 T vs. C - - <1 (-) 36 (-) >0.05
rs35933419 chr6:31261781 HLA-C [+21874bp] C - 12 A vs. G 0.067 (G) 0.133 (G) <1 (-) 25 (-) >0.05
rs114583506 chr6:31263801 HLA-C [+23894bp] C - 12 T vs. G 0.067 (T) 0.1 (T) >1 (-) 26 (-) >0.05
rs1634790 chr6:31276911 HLA-C [+37004bp] C - 12 T vs. G 0.167 (T) - <1 (-) 0 (-) >0.05
rs115345338 chr6:31240836 HLA-C [+929bp] C - 3 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05
rs114265643 chr6:31261851 HLA-C [+21944bp] C - 12 T vs. C 0.067 (T) 0.125 (T) >1 (-) 25 (-) >0.05
rs9368671 chr6:31254704 HLA-C [+14797bp] C - 12 T vs. C 0.033 (T) 0.158 (T) <1 (-) 15 (-) >0.05
rs9394047 chr6:31236250 HLA-C [-276bp] C - 8 A vs. C 0.058 (C) 0.15 (C) >1 (-) 0 (-) >0.05
rs35611056 chr6:31261956 HLA-C [+22049bp] C - 12 A vs. G 0.05 (G) 0.117 (G) <1 (-) 25 (-) >0.05
rs116165038 chr6:31263852 HLA-C [+23945bp] C - 12 C vs. G 0.067 (C) 0.1 (C) >1 (-) 23 (-) >0.05
rs72861484 chr6:31265070 HLA-C [+25163bp] C - 12 A vs. T 0.017 (T) 0.158 (T) >1 (-) 13 (-) >0.05
rs9264961 chr6:31276397 HLA-C [+36490bp] C - 11 A vs. G 0.442 (A) 0.308 (A) >1 (-) 18 (-) >0.05
rs115491491 chr6:31266465 HLA-C [+26558bp] C - 12 A vs. G 0.067 (G) 0.108 (G) <1 (-) 24 (-) >0.05
rs116364562 chr6:31266479 HLA-C [+26572bp] C - 12 C vs. G 0.067 (C) 0.125 (C) >1 (-) 24 (-) >0.05
rs9394050 chr6:31248643 HLA-C [+8736bp] C - 12 A vs. G 0.092 (A) 0.242 (A) >1 (-) 21 (-) >0.05
rs115667045 chr6:31262717 HLA-C [+22810bp] C - 12 A vs. T 0.058 (A) 0.108 (A) >1 (-) 25 (-) >0.05
rs111762561 chr6:31244298 HLA-C [+4391bp] C - 12 A vs. G 0.1 (G) 0.1 (G) >1 (-) 0 (-) >0.05
rs16899203 chr6:31266335 HLA-C [+26428bp] C - 12 T vs. C 0.067 (C) 0.117 (C) <1 (-) 24 (-) >0.05
rs9264960 chr6:31276396 HLA-C [+36489bp] C - 11 T vs. C 0.4 (T) 0.325 (T) >1 (-) 18 (-) >0.05
rs115219503 chr6:31262959 HLA-C [+23052bp] C - 12 T vs. C 0.067 (C) 0.108 (C) <1 (-) 25 (-) >0.05
rs114601085 chr6:31263548 HLA-C [+23641bp] C - 12 T vs. C 0.067 (T) 0.117 (T) >1 (-) 24 (-) >0.05
rs114294380 chr6:31263601 HLA-C [+23694bp] C - 12 T vs. G 0.067 (G) 0.092 (G) <1 (-) 24 (-) >0.05
rs115865502 chr6:31264178 HLA-C [+24271bp] C - 12 T vs. C 0.067 (T) 0.075 (T) >1 (-) 24 (-) >0.05
rs114016160 chr6:31263410 HLA-C [+23503bp] C - 12 A vs. G 0.067 (A) 0.125 (A) >1 (-) 24 (-) >0.05
rs115101855 chr6:31263482 HLA-C [+23575bp] C - 12 A vs. T 0.067 (T) 0.108 (T) <1 (-) 24 (-) >0.05
rs7769586 chr6:31196350 HCG27 [+24605bp] C - 12 A vs. T 0.017 (T) - <1 (-) 0 (-) >0.05
rs11760024 chr6:31263706 HLA-C [+23799bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs35989257 chr6:31242509 HLA-C [+2602bp] C - 12 T vs. C 0.25 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs1634758 chr6:31276200 HLA-C [+36293bp] C - 12 T vs. C 0.158 (T) - <1 (-) 0 (-) >0.05
rs115494471 chr6:31264408 HLA-C [+24501bp] C - 12 T vs. C 0.067 (T) 0.133 (T) >1 (-) 23 (-) >0.05
rs73728416 chr6:31192842 HCG27 [+21097bp] C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs2853956 chr6:31234693 HLA-C [-1833bp] C - 5 A vs. G 0.267 (A) 0.1 (A) <1 (-) 42 (-) >0.05

Association studies for this region [+]