HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28986382 chr6:32752431 HLA-DQB2 [+21120bp] C - 12 A vs. T 0.092 (T) - <1 (-) 0 (-) >0.05
rs28986383 chr6:32752436 HLA-DQB2 [+21125bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs28986403 chr6:32754869 HLA-DQB2 [+23558bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs28986381 chr6:32752429 HLA-DQB2 [+21118bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs28986398 chr6:32754516 HLA-DQB2 [+23205bp] C - 12 A vs. G 0.092 (A) 0.008 (A) >1 (-) 0 (-) >0.05
rs28893551 chr6:32750369 HLA-DQB2 [+19058bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs2857150 chr6:32763821 HLA-DOB [-16719bp] C - 12 A vs. G 0.392 (A) 0.25 (A) <1 (-) 17 (-) >0.05
rs150636480 chr6:32807000 TAP2 [+443bp] C - 11 A vs. G - - <1 (-) 16 (-) >0.05
rs55756782 chr6:32814739 PSMB9 C - 12 A vs. T 0.025 (A) 0.025 (A) >1 (-) 33 (-) >0.05
rs2621349 chr6:32772564 HLA-DOB [-7976bp] C - 12 C vs. G 0.383 (G) - >1 (-) 16 (-) >0.05
rs7760514 chr6:32746309 HLA-DQB2 [+14998bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9276757 chr6:32772856 HLA-DOB [-7684bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs2857121 chr6:32777533 HLA-DOB [-3007bp] C - 12 T vs. C 0.4 (T) 0.258 (T) <1 (-) 13 (-) >0.05
rs112975358 chr6:32814500 PSMB9 C - 12 A vs. G - - >1 (-) 33 (-) >0.05
rs28893549 chr6:32750346 HLA-DQB2 [+19035bp] C - 12 A vs. C 0.083 (A) - >1 (-) 0 (-) >0.05
rs28893550 chr6:32750348 HLA-DQB2 [+19037bp] C - 12 A vs. T 0.083 (A) - >1 (-) 0 (-) >0.05
rs116827595 chr6:32813768 PSMB9 C - 12 A vs. G 0.083 (A) - <1 (-) 13 (-) >0.05
rs56269723 chr6:32774354 HLA-DOB [-6186bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs72854954 chr6:32816219 PSMB9 C - 12 T vs. C 0.025 (T) 0.017 (T) >1 (-) 33 (-) >0.05
rs60526908 chr6:32774339 HLA-DOB [-6201bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2071542 chr6:32811645 PSMB8 C - 12 A vs. G - 0.108 (G) <1 (-) 31 (-) >0.05
rs12663979 chr6:32753654 HLA-DQB2 [+22343bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs72860333 chr6:32819283 PSMB9 C - 12 A vs. G 0.017 (A) 0.025 (A) >1 (-) 33 (-) >0.05
rs28361065 chr6:32786291 HLA-DOB [+1466bp] C - 12 A vs. G 0.083 (A) - >1 (-) 0 (-) >0.05
rs41551515 chr6:32814902 PSMB9 C - 12 T vs. C 0.017 (T) - >1 (-) 33 (-) >0.05
rs28986386 chr6:32753145 HLA-DQB2 [+21834bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs28986392 chr6:32754322 HLA-DQB2 [+23011bp] C - 12 A vs. T 0.083 (T) - <1 (-) 0 (-) >0.05
rs2395271 chr6:32817801 PSMB9 C - 12 T vs. G - - <1 (-) 44 (-) >0.05
rs28986393 chr6:32754340 HLA-DQB2 [+23029bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs28986394 chr6:32754342 HLA-DQB2 [+23031bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs59232059 chr6:32774286 HLA-DOB [-6254bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs9276597 chr6:32733944 HLA-DQB2 [+2633bp] C - 12 A vs. G 0.417 (G) 0.25 (A) >1 (-) 20 (-) >0.05
rs9276706 chr6:32756872 HLA-DOB [-23668bp] C - 12 A vs. T 0.392 (T) - >1 (-) 2 (-) >0.05
rs9276707 chr6:32756874 HLA-DOB [-23666bp] C - 12 A vs. T 0.4 (T) - >1 (-) 2 (-) >0.05
rs55812664 chr6:32774207 HLA-DOB [-6333bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9276611 chr6:32742592 HLA-DQB2 [+11281bp] C - 12 A vs. G 0.267 (G) 0.267 (G) >1 (-) 0 (-) >0.05
rs1480382 chr6:32740895 HLA-DQB2 [+9584bp] C - 12 T vs. C 0.258 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs145605746 chr6:32823829 PSMB9 C - 7 A vs. G - - <1 (-) 42 (-) >0.05
rs33998906 chr6:32733628 HLA-DQB2 [+2317bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs115452117 chr6:32819745 PSMB9 C - 12 A vs. G 0.025 (A) - >1 (-) 33 (-) >0.05
rs3948793 chr6:32759448 HLA-DOB [-21092bp] C - 12 A vs. G 0.267 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs56410936 chr6:32809887 PSMB8 C - 11 A vs. G - 0.008 (G) <1 (-) 15 (-) >0.05
rs115675578 chr6:32811199 PSMB8 C - 11 A vs. T 0.017 (A) - >1 (-) 15 (-) >0.05
rs9501203 chr6:32746329 HLA-DQB2 [+15018bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs61681247 chr6:32816053 PSMB9 C - 12 T vs. C 0.025 (T) - >1 (-) 33 (-) >0.05
rs2621353 chr6:32771531 HLA-DOB [-9009bp] C - 12 C vs. G - - >1 (-) 16 (-) >0.05
rs2228397 chr6:32800224 TAP2 C - 11 A vs. C 0.183 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs13501 chr6:32793523 TAP2 C - 12 A vs. G 0.358 (A) 0.417 (A) >1 (-) 0 (-) >0.05
rs2894295 chr6:32779090 HLA-DOB [-1450bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs9276612 chr6:32742712 HLA-DQB2 [+11401bp] C - 12 A vs. G 0.258 (A) 0.275 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]