HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9274656 chr6:32636351 HLA-DQB1 [+191bp] C - 4 T vs. C 0.217 (C) 0.475 (T) >1 (-) 0 (-) >0.05
rs9274688 chr6:32636900 HLA-DQB1 [+740bp] C - 4 T vs. C 0.292 (T) 0.408 (T) <1 (-) 0 (-) >0.05
rs9275332 chr6:32666943 HLA-DQB1 [+30783bp] C - 12 A vs. G 0.317 (A) 0.275 (A) <1 (-) 64 (-) >0.05
rs3828809 chr6:32636172 HLA-DQB1 [+12bp] C - 4 T vs. C 0.217 (T) 0.467 (C) <1 (-) 0 (-) >0.05
rs35406945 chr6:32577695 HLA-DQA1 [-18261bp] C - 5 A vs. C 0.142 (C) 0.025 (C) >1 (-) 4 (-) >0.05
rs9271611 chr6:32591609 HLA-DQA1 [-4347bp] C - 9 A vs. G 0.308 (G) 0.258 (G) <1 (-) 37 (-) >0.05
rs17206147 chr6:32665311 HLA-DQB1 [+29151bp] C - 12 T vs. C 0.15 (C) 0.167 (C) <1 (-) 66 (-) >0.05
rs2395522 chr6:32664722 HLA-DQB1 [+28562bp] C - 12 A vs. T 0.492 (A) 0.408 (A) >1 (-) 21 (-) >0.05
rs9275259 chr6:32661572 HLA-DQB1 [+25412bp] C - 12 A vs. C 0.475 (A) 0.433 (C) <1 (-) 21 (-) >0.05
rs9275266 chr6:32662392 HLA-DQB1 [+26232bp] C - 12 C vs. G - - <1 (-) 28 (-) >0.05
rs56245106 chr6:32577846 HLA-DQA1 [-18110bp] C - 5 T vs. C 0.142 (C) 0.025 (C) >1 (-) 6 (-) >0.05
rs9275239 chr6:32660717 HLA-DQB1 [+24557bp] C - 12 A vs. G 0.45 (A) 0.5 (A) <1 (-) 20 (-) >0.05
rs67373575 chr6:32682043 HLA-DQA2 [-27076bp] C - 11 A vs. T 0.133 (T) 0.117 (T) <1 (-) 69 (-) >0.05
rs9275265 chr6:32662389 HLA-DQB1 [+26229bp] C - 12 T vs. C - - <1 (-) 29 (-) >0.05
rs9275404 chr6:32669878 HLA-DQB1 [+33718bp] C - 12 T vs. C 0.333 (C) 0.308 (C) >1 (-) 58 (-) >0.05
rs2647024 chr6:32636184 HLA-DQB1 [+24bp] C - 4 T vs. C 0.192 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs34342308 chr6:32590665 HLA-DQA1 [-5291bp] C - 8 A vs. G 0.192 (G) 0.142 (G) <1 (-) 50 (-) >0.05
rs9275271 chr6:32662533 HLA-DQB1 [+26373bp] C - 12 T vs. C - - >1 (-) 26 (-) >0.05
rs9275337 chr6:32667318 HLA-DQB1 [+31158bp] C - 12 T vs. G 0.317 (T) 0.292 (T) <1 (-) 66 (-) >0.05
rs72844346 chr6:32662033 HLA-DQB1 [+25873bp] C - 12 A vs. G - - >1 (-) 23 (-) >0.05
rs9275212 chr6:32658327 HLA-DQB1 [+22167bp] C - 12 T vs. G 0.458 (G) 0.233 (G) <1 (-) 41 (-) >0.05
rs9275261 chr6:32661809 HLA-DQB1 [+25649bp] C - 12 T vs. C - - >1 (-) 25 (-) >0.05
rs9275282 chr6:32662974 HLA-DQB1 [+26814bp] C - 12 T vs. C 0.492 (T) 0.417 (C) <1 (-) 22 (-) >0.05
rs111391378 chr6:32662024 HLA-DQB1 [+25864bp] C - 12 A vs. G - - >1 (-) 23 (-) >0.05
rs9275482 chr6:32672932 HLA-DQA2 [-36187bp] C - 12 T vs. G 0.325 (T) 0.258 (T) <1 (-) 60 (-) >0.05
rs28535317 chr6:32589065 HLA-DQA1 [-6891bp] C - 4 A vs. G 0.142 (G) 0.025 (G) >1 (-) 14 (-) >0.05
rs9275355 chr6:32667829 HLA-DQB1 [+31669bp] C - 12 T vs. C 0.3 (C) 0.275 (C) >1 (-) 64 (-) >0.05
rs9272236 chr6:32602702 HLA-DQA1 C - 4 T vs. C 0.15 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs73730369 chr6:32584133 HLA-DQA1 [-11823bp] C - 3 T vs. C 0.017 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs3134966 chr6:32674298 HLA-DQA2 [-34821bp] C - 12 T vs. C 0.283 (T) 0.125 (T) >1 (-) 31 (-) >0.05
rs9275372 chr6:32668388 HLA-DQB1 [+32228bp] C - 12 T vs. C 0.325 (T) 0.292 (T) <1 (-) 62 (-) >0.05
rs9272225 chr6:32602372 HLA-DQA1 C - 4 T vs. G 0.158 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs202170080 chr6:32662240 HLA-DQB1 [+26080bp] C - 12 A vs. G - - <1 (-) 22 (-) >0.05
rs3828787 chr6:32635743 HLA-DQB1 C - 4 T vs. C 0.183 (C) 0.317 (C) >1 (-) 0 (-) >0.05
rs3828788 chr6:32635749 HLA-DQB1 C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs77015620 chr6:32583783 HLA-DQA1 [-12173bp] C - 3 A vs. G 0.017 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs9272219 chr6:32602269 HLA-DQA1 C - 4 T vs. G 0.158 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs2856687 chr6:32654822 HLA-DQB1 [+18662bp] C - 10 T vs. C 0.417 (T) 0.258 (T) >1 (-) 25 (-) >0.05
rs3129761 chr6:32585504 HLA-DQA1 [-10452bp] C - 4 C vs. G 0.408 (C) 0.458 (G) <1 (-) 21 (-) >0.05
rs71556930 chr6:32668026 HLA-DQB1 [+31866bp] C - 11 T vs. C - - >1 (-) 71 (-) >0.05
rs9274701 chr6:32637181 HLA-DQB1 [+1021bp] C - 4 T vs. G 0.3 (G) 0.375 (G) >1 (-) 1 (-) >0.05
rs9275269 chr6:32662459 HLA-DQB1 [+26299bp] C - 12 A vs. G - - >1 (-) 24 (-) >0.05
rs9275401 chr6:32669827 HLA-DQB1 [+33667bp] C - 12 C vs. G 0.325 (G) 0.292 (G) >1 (-) 60 (-) >0.05
rs9274700 chr6:32637180 HLA-DQB1 [+1020bp] C - 4 A vs. G 0.292 (G) 0.367 (G) >1 (-) 1 (-) >0.05
rs9275354 chr6:32667820 HLA-DQB1 [+31660bp] C - 12 T vs. G 0.283 (G) 0.192 (G) >1 (-) 64 (-) >0.05
rs6457614 chr6:32651900 HLA-DQB1 [+15740bp] C - 4 T vs. G 0.133 (G) 0.033 (G) >1 (-) 9 (-) >0.05
rs2856699 chr6:32671765 HLA-DQB1 [+35605bp] C - 12 A vs. G 0.408 (A) 0.242 (A) >1 (-) 30 (-) >0.05
rs66490218 chr6:32668105 HLA-DQB1 [+31945bp] C - 11 A vs. G 0.133 (A) 0.033 (A) >1 (-) 71 (-) >0.05
rs115675626 chr6:32669833 HLA-DQB1 [+33673bp] C - 11 A vs. G - - >1 (-) 67 (-) >0.05
rs3129726 chr6:32678206 HLA-DQA2 [-30913bp] C - 12 A vs. G 0.283 (G) 0.125 (G) <1 (-) 28 (-) >0.05

Association studies for this region [+]