HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28747004 chr6:32654379 HLA-DQB1 [+18219bp] C - 6 A vs. T 0.175 (A) 0.242 (A) >1 (-) 24 (-) >0.05
rs9272163 chr6:32601146 HLA-DQA1 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs28383307 chr6:32586755 HLA-DQA1 [-9201bp] C - 3 T vs. C 0.133 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs28747046 chr6:32655539 HLA-DQB1 [+19379bp] C - 6 A vs. G 0.167 (G) 0.317 (G) <1 (-) 26 (-) >0.05
rs9273466 chr6:32627967 HLA-DQB1 C - 4 A vs. G - - >1 (-) 50 (-) >0.05
rs28747045 chr6:32655537 HLA-DQB1 [+19377bp] C - 6 T vs. C 0.167 (C) 0.317 (C) <1 (-) 26 (-) >0.05
rs28746900 chr6:32648652 HLA-DQB1 [+12492bp] C - 4 A vs. G 0.183 (G) 0.342 (G) <1 (-) 63 (-) >0.05
rs28746979 chr6:32653648 HLA-DQB1 [+17488bp] C - 6 A vs. C - - >1 (-) 20 (-) >0.05
rs28747028 chr6:32654989 HLA-DQB1 [+18829bp] C - 6 T vs. C 0.167 (T) 0.308 (T) >1 (-) 25 (-) >0.05
rs28747027 chr6:32654977 HLA-DQB1 [+18817bp] C - 6 C vs. G 0.167 (G) 0.3 (G) <1 (-) 25 (-) >0.05
rs28746899 chr6:32648646 HLA-DQB1 [+12486bp] C - 4 A vs. G 0.183 (A) 0.342 (A) >1 (-) 63 (-) >0.05
rs28746916 chr6:32649579 HLA-DQB1 [+13419bp] C - 4 A vs. G 0.192 (A) 0.35 (A) >1 (-) 62 (-) >0.05
rs9275659 chr6:32686103 HLA-DQA2 [-23016bp] C - 11 A vs. C 0.2 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs9275657 chr6:32685967 HLA-DQA2 [-23152bp] C - 11 A vs. G 0.2 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs28746980 chr6:32653651 HLA-DQB1 [+17491bp] C - 6 A vs. G 0.092 (A) 0.167 (A) >1 (-) 21 (-) >0.05
rs28747025 chr6:32654831 HLA-DQB1 [+18671bp] C - 6 C vs. G - - >1 (-) 23 (-) >0.05
rs28747024 chr6:32654830 HLA-DQB1 [+18670bp] C - 6 A vs. G - - >1 (-) 23 (-) >0.05
rs28371261 chr6:32658727 HLA-DQB1 [+22567bp] C - 8 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs9275652 chr6:32685822 HLA-DQA2 [-23297bp] C - 11 C vs. G 0.2 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs28746906 chr6:32648863 HLA-DQB1 [+12703bp] C - 4 A vs. G 0.15 (A) 0.325 (A) >1 (-) 62 (-) >0.05
rs28746905 chr6:32648842 HLA-DQB1 [+12682bp] C - 4 T vs. C 0.175 (T) 0.333 (T) >1 (-) 63 (-) >0.05
rs113467005 chr6:32668699 HLA-DQB1 [+32539bp] C - 6 A vs. T - - <1 (-) 1 (-) >0.05
rs112230901 chr6:32668483 HLA-DQB1 [+32323bp] C - 6 T vs. C - - <1 (-) 1 (-) >0.05
rs9275655 chr6:32685918 HLA-DQA2 [-23201bp] C - 11 A vs. G 0.2 (G) 0.075 (G) <1 (-) 0 (-) >0.05
rs28746929 chr6:32650068 HLA-DQB1 [+13908bp] C - 4 A vs. G 0.183 (G) 0.233 (G) <1 (-) 64 (-) >0.05
rs117392376 chr6:32672892 HLA-DQA2 [-36227bp] C - 5 A vs. G - 0.042 (A) >1 (-) 13 (-) >0.05
rs3129736 chr6:32685953 HLA-DQA2 [-23166bp] C - 12 T vs. C 0.3 (C) 0.158 (C) >1 (-) 1 (-) >0.05
rs28752515 chr6:32583603 HLA-DQA1 [-12353bp] C - 4 A vs. G 0.375 (G) 0.417 (A) <1 (-) 0 (-) >0.05
rs17206035 chr6:32652224 HLA-DQB1 [+16064bp] C - 6 T vs. C 0.175 (C) 0.308 (C) <1 (-) 38 (-) >0.05
rs28746930 chr6:32650074 HLA-DQB1 [+13914bp] C - 4 A vs. G 0.183 (A) 0.233 (A) >1 (-) 64 (-) >0.05
rs28747044 chr6:32655516 HLA-DQB1 [+19356bp] C - 6 T vs. C 0.15 (C) 0.3 (C) <1 (-) 24 (-) >0.05
rs28746925 chr6:32649932 HLA-DQB1 [+13772bp] C - 4 A vs. G 0.183 (G) 0.25 (G) <1 (-) 63 (-) >0.05
rs3134967 chr6:32659315 HLA-DQB1 [+23155bp] C - 7 A vs. G - - >1 (-) 17 (-) >0.05
rs114289808 chr6:32662613 HLA-DQB1 [+26453bp] C - 11 A vs. T 0.017 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs2647011 chr6:32661915 HLA-DQB1 [+25755bp] C - 11 A vs. C 0.333 (A) - <1 (-) 0 (-) >0.05
rs1694115 chr6:32652215 HLA-DQB1 [+16055bp] C - 6 A vs. G 0.167 (A) 0.333 (A) >1 (-) 39 (-) >0.05
rs9271489 chr6:32589051 HLA-DQA1 [-6905bp] C - 4 A vs. C 0.192 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs17533167 chr6:32590844 HLA-DQA1 [-5112bp] C - 8 C vs. G 0.142 (C) - >1 (-) 67 (-) >0.05
rs28752520 chr6:32584739 HLA-DQA1 [-11217bp] C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs17206350 chr6:32675067 HLA-DQA2 [-34052bp] C - 12 T vs. C 0.4 (C) 0.45 (T) <1 (-) 22 (-) >0.05
rs3873444 chr6:32682724 HLA-DQA2 [-26395bp] C - 11 T vs. C 0.117 (T) - >1 (-) 1 (-) >0.05
rs9273325 chr6:32623193 HLA-DQB1 [-4051bp] C - 4 A vs. G 0.092 (A) 0.117 (A) >1 (-) 52 (-) >0.05
rs2858316 chr6:32662501 HLA-DQB1 [+26341bp] C - 12 A vs. T 0.083 (T) - >1 (-) 0 (-) >0.05
rs28747011 chr6:32654554 HLA-DQB1 [+18394bp] C - 6 A vs. G - - <1 (-) 23 (-) >0.05
rs28747010 chr6:32654552 HLA-DQB1 [+18392bp] C - 6 C vs. G - - <1 (-) 23 (-) >0.05
rs17212427 chr6:32652425 HLA-DQB1 [+16265bp] C - 5 T vs. C 0.15 (C) 0.217 (C) <1 (-) 47 (-) >0.05
rs28747043 chr6:32655508 HLA-DQB1 [+19348bp] C - 6 A vs. G 0.158 (G) 0.25 (G) <1 (-) 24 (-) >0.05
rs3129717 chr6:32659308 HLA-DQB1 [+23148bp] C - 7 T vs. C - - >1 (-) 17 (-) >0.05
rs28752523 chr6:32584772 HLA-DQA1 [-11184bp] C - 3 T vs. C - 0.042 (T) <1 (-) 0 (-) >0.05
rs9275569 chr6:32678136 HLA-DQA2 [-30983bp] C - 12 T vs. C 0.425 (C) 0.392 (C) <1 (-) 9 (-) >0.05

Association studies for this region [+]