HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28371255 chr6:32658351 HLA-DQB1 [+22191bp] C - 10 A vs. T 0.075 (T) 0.183 (T) >1 (-) 0 (-) >0.05
rs2647014 chr6:32664279 HLA-DQB1 [+28119bp] C - 12 T vs. C 0.075 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs2647005 chr6:32664760 HLA-DQB1 [+28600bp] C - 12 A vs. G 0.075 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs28371274 chr6:32674558 HLA-DQA2 [-34561bp] C - 12 T vs. C - 0.083 (C) >1 (-) 0 (-) >0.05
rs2647017 chr6:32663772 HLA-DQB1 [+27612bp] C - 12 T vs. G 0.075 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs2856669 chr6:32663360 HLA-DQB1 [+27200bp] C - 12 A vs. G 0.075 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs2858315 chr6:32662724 HLA-DQB1 [+26564bp] C - 12 A vs. C 0.075 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs28371256 chr6:32658366 HLA-DQB1 [+22206bp] C - 10 T vs. C 0.075 (C) 0.25 (C) >1 (-) 0 (-) >0.05
rs9272071 chr6:32599487 HLA-DQA1 C - 3 C vs. G 0.383 (C) 0.158 (C) <1 (-) 0 (-) >0.05
rs28747034 chr6:32655257 HLA-DQB1 [+19097bp] C - 8 T vs. C 0.158 (T) 0.292 (T) >1 (-) 11 (-) >0.05
rs2647015 chr6:32664093 HLA-DQB1 [+27933bp] C - 12 T vs. G 0.075 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs79951097 chr6:32662954 HLA-DQB1 [+26794bp] C - 11 T vs. C 0.008 (C) 0.117 (C) <1 (-) 0 (-) >0.05
rs9272121 chr6:32600556 HLA-DQA1 C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs28747020 chr6:32654760 HLA-DQB1 [+18600bp] C - 6 T vs. C 0.167 (C) 0.325 (C) <1 (-) 21 (-) >0.05
rs114730461 chr6:32672935 HLA-DQA2 [-36184bp] C - 6 A vs. C - - >1 (-) 0 (-) >0.05
rs2856675 chr6:32658768 HLA-DQB1 [+22608bp] C - 8 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs28747019 chr6:32654757 HLA-DQB1 [+18597bp] C - 6 A vs. C 0.175 (A) 0.325 (A) >1 (-) 22 (-) >0.05
rs9271535 chr6:32589959 HLA-DQA1 [-5997bp] C - 4 T vs. C 0.183 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs9271612 chr6:32591654 HLA-DQA1 [-4302bp] C - 11 A vs. G 0.108 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs17212343 chr6:32652147 HLA-DQB1 [+15987bp] C - 6 A vs. G 0.167 (G) 0.333 (G) <1 (-) 42 (-) >0.05
rs2858313 chr6:32663919 HLA-DQB1 [+27759bp] C - 12 A vs. G 0.075 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs28371254 chr6:32657452 HLA-DQB1 [+21292bp] C - 10 T vs. C 0.075 (C) 0.142 (C) >1 (-) 0 (-) >0.05
rs28675927 chr6:32603488 HLA-DQA1 C - 5 A vs. G 0.242 (G) 0.275 (G) >1 (-) 68 (-) >0.05
rs28407322 chr6:32603355 HLA-DQA1 C - 5 T vs. C 0.258 (C) 0.275 (C) >1 (-) 69 (-) >0.05
rs141748883 chr6:32663156 HLA-DQB1 [+26996bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs2647002 chr6:32657082 HLA-DQB1 [+20922bp] C - 10 A vs. G 0.075 (G) 0.167 (G) >1 (-) 0 (-) >0.05
rs9271613 chr6:32591666 HLA-DQA1 [-4290bp] C - 11 T vs. C 0.108 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs9271633 chr6:32592072 HLA-DQA1 [-3884bp] C - 11 T vs. G 0.117 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs9271626 chr6:32591944 HLA-DQA1 [-4012bp] C - 11 A vs. C 0.108 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs9271627 chr6:32591949 HLA-DQA1 [-4007bp] C - 11 T vs. C 0.108 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs28746904 chr6:32648773 HLA-DQB1 [+12613bp] C - 4 T vs. C 0.158 (C) 0.325 (C) <1 (-) 62 (-) >0.05
rs28747012 chr6:32654558 HLA-DQB1 [+18398bp] C - 6 T vs. C - - <1 (-) 24 (-) >0.05
rs28746927 chr6:32650029 HLA-DQB1 [+13869bp] C - 4 T vs. C - - >1 (-) 63 (-) >0.05
rs28746926 chr6:32650026 HLA-DQB1 [+13866bp] C - 4 C vs. G - - >1 (-) 63 (-) >0.05
rs17427494 chr6:32665001 HLA-DQB1 [+28841bp] C - 11 A vs. T - 0.133 (A) >1 (-) 0 (-) >0.05
rs28383241 chr6:32584319 HLA-DQA1 [-11637bp] C - 4 A vs. C 0.442 (C) - <1 (-) 0 (-) >0.05
rs2647049 chr6:32672681 HLA-DQA2 [-36438bp] C - 12 A vs. C 0.083 (A) 0.15 (A) <1 (-) 0 (-) >0.05
rs2856705 chr6:32670956 HLA-DQB1 [+34796bp] C - 12 T vs. C 0.083 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs28746903 chr6:32648768 HLA-DQB1 [+12608bp] C - 4 T vs. C 0.158 (T) 0.325 (T) >1 (-) 62 (-) >0.05
rs112767544 chr6:32665100 HLA-DQB1 [+28940bp] C - 7 A vs. C - 0.042 (A) <1 (-) 28 (-) >0.05
rs12192514 chr6:32674240 HLA-DQA2 [-34879bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs17212329 chr6:32652005 HLA-DQB1 [+15845bp] C - 6 T vs. C 0.183 (T) 0.342 (T) >1 (-) 46 (-) >0.05
rs140055405 chr6:32665136 HLA-DQB1 [+28976bp] C - 7 T vs. G - - >1 (-) 28 (-) >0.05
rs112495399 chr6:32665155 HLA-DQB1 [+28995bp] C - 7 T vs. C - - >1 (-) 28 (-) >0.05
rs28371272 chr6:32674440 HLA-DQA2 [-34679bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs28371273 chr6:32674442 HLA-DQA2 [-34677bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs3135003 chr6:32591476 HLA-DQA1 [-4480bp] C - 11 T vs. C 0.117 (T) 0.092 (T) >1 (-) 0 (-) >0.05
rs16898262 chr6:32677397 HLA-DQA2 [-31722bp] C - 12 A vs. G 0.083 (G) 0.083 (G) >1 (-) 0 (-) >0.05
rs9271524 chr6:32589820 HLA-DQA1 [-6136bp] C - 11 A vs. C 0.117 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs28371258 chr6:32658513 HLA-DQB1 [+22353bp] C - 10 T vs. C 0.075 (C) 0.183 (C) >1 (-) 0 (-) >0.05

Association studies for this region [+]