HLA-DRB1, chr6:32546546-32557625 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs504594 - HLA-DRB1 All: C 104,595 13 C vs. A - - 1.24 (1.17-1.32) 36 (0-67) 5.73e-13
Meta_image?name=rs504594

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9271349 chr6:32583830 HLA-DQA1 [-12126bp] All: C 52,167 6 A vs. G 0.233 (A) 0.267 (A) 1.18 (1.10-1.27) 39 (0-76) 5.97e-06
rs2516049 chr6:32570400 HLA-DRB1 [+12775bp] All: C 35,908 11 C vs. T 0.392 (C) 0.167 (C) 0.90 (0.86-0.94) 0 (0-41) 6.77e-06
rs2454138 chr6:32570401 HLA-DRB1 [+12776bp] All: C 35,908 11 A vs. G 0.367 (A) 0.15 (A) 0.90 (0.86-0.94) 0 (0-41) 6.89e-06
rs9271351 chr6:32583860 HLA-DQA1 [-12096bp] C - 5 C vs. G 0.2 (C) 0.15 (C) >1 (-) 28 (-) <1.00e-04
rs3997873 chr6:32580723 HLA-DQA1 [-15233bp] All: C 52,167 6 G vs. T 0.208 (G) 0.15 (G) 1.18 (1.10-1.26) 45 (0-78) 8.81e-06
rs4367411 chr6:32571929 HLA-DRB1 [+14304bp] All: C 45,262 5 C vs. T 0.267 (C) - 1.24 (1.13-1.36) 59 (0-85) 9.45e-06
rs9271116 chr6:32576764 HLA-DRB1 [+19139bp] All: C 45,262 5 T vs. G 0.217 (T) 0.158 (T) 1.22 (1.12-1.34) 62 (0-86) 9.92e-06
rs4478449 chr6:32571801 HLA-DRB1 [+14176bp] All: C 45,262 5 A vs. G 0.25 (A) 0.425 (A) 1.24 (1.12-1.36) 57 (0-84) 1.12e-05
rs9271347 chr6:32583543 HLA-DQA1 [-12413bp] All: C 52,167 6 A vs. G 0.208 (A) 0.158 (A) 1.18 (1.09-1.27) 36 (0-75) 1.32e-05
rs13193700 chr6:32575078 HLA-DRB1 [+17453bp] All: C 70,102 3 C vs. T - - 1.13 (1.07-1.20) 0 (-) 1.41e-05
rs13193606 chr6:32575044 HLA-DRB1 [+17419bp] All: C 70,102 3 C vs. T - - 1.13 (1.07-1.19) 0 (0-4) 1.43e-05
rs9271683 chr6:32592950 HLA-DQA1 [-3006bp] All: C 44,247 3 C vs. T 0.242 (C) 0.233 (C) 1.19 (1.10-1.28) 59 (0-88) 1.59e-05
rs3129756 chr6:32583063 HLA-DQA1 [-12893bp] All: C 45,262 5 A vs. G - - 1.21 (1.11-1.32) 19 (0-83) 1.69e-05
rs9270928 chr6:32572461 HLA-DRB1 [+14836bp] All: C 45,262 5 G vs. T 0.208 (G) 0.167 (G) 1.23 (1.12-1.36) 61 (0-85) 1.90e-05
rs9271732 chr6:32593627 HLA-DQA1 [-2329bp] All: C 44,247 3 G vs. A 0.267 (G) 0.292 (G) 1.20 (1.11-1.31) 53 (0-86) 2.02e-05
rs647035 chr6:32576626 HLA-DRB1 [+19001bp] All: C 75,053 5 A vs. G 0.467 (A) 0.308 (A) 0.89 (0.85-0.94) 41 (0-78) 2.10e-05
rs3129768 chr6:32595083 HLA-DQA1 [-873bp] C - 3 T vs. G 0.225 (G) 0.233 (G) <1 (-) 31 (-) <1.00e-04
rs3104390 chr6:32595031 HLA-DQA1 [-925bp] C - 3 A vs. T 0.225 (A) 0.25 (A) >1 (-) 29 (-) <1.00e-04
rs9271701 chr6:32593199 HLA-DQA1 [-2757bp] All: C 44,247 3 T vs. C 0.233 (T) 0.267 (T) 1.18 (1.09-1.28) 55 (0-87) 2.35e-05
rs2647059 chr6:32569362 HLA-DRB1 [+11737bp] C - 7 C vs. G - - <1 (-) 0 (-) <1.00e-04
rs2647066 chr6:32571122 HLA-DRB1 [+13497bp] C - 7 T vs. C 0.258 (T) 0.208 (T) <1 (-) 33 (-) <1.00e-04
rs9271719 chr6:32593479 HLA-DQA1 [-2477bp] All: C 44,247 3 C vs. T 0.225 (C) 0.242 (C) 1.18 (1.09-1.28) 65 (0-90) 2.86e-05
rs9271695 chr6:32593080 HLA-DQA1 [-2876bp] All: C 44,247 3 A vs. G 0.233 (A) 0.233 (A) 1.17 (1.09-1.27) 62 (0-89) 3.39e-05
rs9271710 chr6:32593421 HLA-DQA1 [-2535bp] All: C 44,247 3 G vs. A 0.25 (G) 0.267 (G) 1.19 (1.10-1.29) 24 (0-92) 3.50e-05
rs35484705 chr6:32583051 HLA-DQA1 [-12905bp] All: C 45,262 5 C vs. T 0.483 (C) 0.342 (T) 1.20 (1.10-1.30) 12 (0-82) 3.58e-05
rs34599306 chr6:32583557 HLA-DQA1 [-12399bp] C - 4 C vs. G 0.475 (C) 0.417 (G) >1 (-) 0 (-) <1.00e-04
rs9271640 chr6:32592200 HLA-DQA1 [-3756bp] All: C 44,247 3 T vs. C 0.225 (T) 0.275 (T) 1.16 (1.08-1.24) 65 (0-90) 3.74e-05
rs9271639 chr6:32592143 HLA-DQA1 [-3813bp] All: C 44,247 3 A vs. G 0.258 (A) 0.3 (A) 1.16 (1.08-1.24) 64 (0-90) 3.97e-05
rs3129752 chr6:32582627 HLA-DQA1 [-13329bp] C - 4 C vs. G 0.475 (G) 0.433 (C) <1 (-) 0 (-) <1.00e-04
rs9271641 chr6:32592209 HLA-DQA1 [-3747bp] All: C 44,247 3 A vs. G 0.233 (A) 0.267 (A) 1.16 (1.08-1.24) 65 (0-90) 4.19e-05
rs9271634 chr6:32592112 HLA-DQA1 [-3844bp] All: C 44,247 3 A vs. G 0.275 (A) - 1.16 (1.08-1.24) 64 (0-90) 4.23e-05
rs9271601 chr6:32591337 HLA-DQA1 [-4619bp] C - 6 A vs. T 0.45 (T) 0.483 (T) >1 (-) 0 (-) <1.00e-04
rs3129754 chr6:32583046 HLA-DQA1 [-12910bp] All: C 45,262 5 A vs. G 0.483 (A) 0.325 (G) 1.19 (1.09-1.29) 23 (0-69) 5.64e-05
rs28383233 chr6:32584153 HLA-DQA1 [-11803bp] C - 4 A vs. G 0.342 (G) 0.442 (A) <1 (-) 0 (-) <1.00e-04
rs9271650 chr6:32592383 HLA-DQA1 [-3573bp] All: C 44,247 3 T vs. C 0.267 (T) - 1.16 (1.08-1.25) 16 (0-91) 6.51e-05
rs28383221 chr6:32583212 HLA-DQA1 [-12744bp] C - 4 A vs. G 0.375 (A) 0.45 (G) >1 (-) 0 (-) <1.00e-04
rs9271763 chr6:32594061 HLA-DQA1 [-1895bp] All: C 44,247 3 A vs. G 0.433 (A) 0.475 (A) 1.16 (1.08-1.25) 27 (0-92) 7.46e-05
rs4587163 chr6:32593167 HLA-DQA1 [-2789bp] All: C 44,247 3 T vs. C 0.383 (T) 0.492 (T) 0.86 (0.80-0.93) 27 (0-92) 7.47e-05
rs3104369 chr6:32602482 HLA-DQA1 All: C 45,262 5 T vs. C 0.292 (T) 0.25 (T) 1.15 (1.07-1.23) 34 (0-75) 7.81e-05
rs17425622 chr6:32571961 HLA-DRB1 [+14336bp] All: C 8,889 3 C vs. T 0.217 (C) 0.158 (C) 0.79 (0.71-0.89) 0 (0-85) 8.07e-05
rs28752514 chr6:32583576 HLA-DQA1 [-12380bp] C - 4 T vs. C 0.367 (T) 0.408 (C) >1 (-) 0 (-) <1.00e-04
rs614348 chr6:32573877 HLA-DRB1 [+16252bp] All: C 74,051 4 C vs. T 0.458 (C) 0.183 (C) 0.90 (0.86-0.95) 0 (0-68) 8.83e-05
rs3129760 chr6:32585409 HLA-DQA1 [-10547bp] All: C 84,927 7 A vs. G - - 0.82 (0.75-0.91) 46 (0-77) 9.04e-05
rs9271721 chr6:32593519 HLA-DQA1 [-2437bp] All: C 44,247 3 G vs. A 0.225 (G) 0.258 (G) 1.17 (1.08-1.27) 47 (0-84) 9.37e-05
rs9271548 chr6:32590234 HLA-DQA1 [-5722bp] C - 9 A vs. T 0.425 (A) 0.392 (A) >1 (-) 0 (-) <1.00e-04
rs3129751 chr6:32582189 HLA-DQA1 [-13767bp] All: C 42,293 4 C vs. A 0.267 (C) 0.05 (C) 0.82 (0.74-0.91) 0 (0-83) 9.74e-05
rs3129755 chr6:32583057 HLA-DQA1 [-12899bp] C - 4 A vs. G 0.425 (A) 0.317 (G) >1 (-) 0 (-) <0.05
rs1966002 chr6:32581684 HLA-DQA1 [-14272bp] All: C 45,262 5 T vs. G - - 1.14 (1.07-1.22) 53 (0-83) 1.23e-04
rs9271180 chr6:32578209 HLA-DQA1 [-17747bp] All: C 84,927 7 C vs. T 0.367 (C) 0.2 (C) 1.11 (1.05-1.17) 0 (0-60) 1.29e-04
rs3104415 chr6:32582577 HLA-DQA1 [-13379bp] All: C 45,262 5 C vs. A 0.408 (C) 0.292 (C) 0.87 (0.81-0.93) 8 (0-81) 1.34e-04

Association studies for this region [+]