IL12RB2, chr1:67773047-67862583 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17129917 chr1:67844710 IL12RB2 C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115853050 chr1:67871782 SERBP1 [-1711bp] C - 7 T vs. G 0.008 (T) - >1 (-) 0 (-) >0.05
rs17129983 chr1:67860297 IL12RB2 C - 13 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs72678531 chr1:67798445 IL12RB2 C - 13 T vs. C 0.225 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs7546245 chr1:67750474 RNU4ATAC4P [+17065bp] C - 13 T vs. C 0.3 (C) 0.5 (C) <1 (-) 0 (-) >0.05
rs2017314 chr1:67748140 RNU4ATAC4P [+14731bp] C - 13 A vs. C 0.442 (A) 0.475 (C) >1 (-) 14 (-) >0.05
rs78691454 chr1:67725207 IL23R C - 7 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs6698141 chr1:67741314 RNU4ATAC4P [+7905bp] C - 13 C vs. G 0.308 (C) 0.483 (C) >1 (-) 0 (-) >0.05
rs11209050 chr1:67791736 IL12RB2 C - 13 A vs. C 0.258 (A) 0.233 (A) >1 (-) 0 (-) >0.05
rs6669016 chr1:67792931 IL12RB2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs3762316 chr1:67772023 IL12RB2 [-1024bp] C - 13 A vs. G 0.15 (G) 0.183 (G) >1 (-) 38 (-) >0.05
rs75920049 chr1:67723316 IL23R C - 9 A vs. G - - <1 (-) 36 (-) >0.05
rs111379368 chr1:67735360 RNU4ATAC4P [+1951bp] C - 13 T vs. G 0.05 (G) - >1 (-) 0 (-) >0.05
rs3762315 chr1:67772011 IL12RB2 [-1036bp] C - 13 A vs. G 0.15 (G) 0.2 (G) >1 (-) 40 (-) >0.05
rs3977726 chr1:67815915 IL12RB2 C - 13 A vs. C 0.25 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs12141431 chr1:67747023 RNU4ATAC4P [+13614bp] C - 13 C vs. G 0.292 (C) 0.492 (C) >1 (-) 0 (-) >0.05
rs1532502 chr1:67737650 RNU4ATAC4P [+4241bp] C - 13 A vs. G 0.3 (A) 0.467 (A) >1 (-) 0 (-) >0.05
rs12141575 chr1:67747436 RNU4ATAC4P [+14027bp] C - 13 A vs. G 0.308 (A) 0.492 (A) >1 (-) 0 (-) >0.05
rs12033764 chr1:67734482 RNU4ATAC4P [+1073bp] C - 13 T vs. C 0.3 (T) 0.492 (T) >1 (-) 0 (-) >0.05
rs12119179 chr1:67747415 RNU4ATAC4P [+14006bp] C - 13 A vs. C 0.308 (C) 0.492 (C) <1 (-) 0 (-) >0.05
rs11209040 chr1:67752671 RNU4ATAC4P [+19262bp] C - 13 A vs. G 0.308 (A) 0.492 (A) >1 (-) 0 (-) >0.05
rs6660226 chr1:67744601 RNU4ATAC4P [+11192bp] C - 13 A vs. G 0.458 (A) 0.217 (A) >1 (-) 1 (-) >0.05
rs6676660 chr1:67745895 RNU4ATAC4P [+12486bp] C - 13 A vs. T 0.308 (A) 0.483 (A) >1 (-) 0 (-) >0.05
rs56018543 chr1:67850350 IL12RB2 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs138534265 chr1:67849602 IL12RB2 C - 3 T vs. G - - <1 (-) 0 (-) >0.05
rs10489626 chr1:67793171 IL12RB2 C - 13 C vs. G 0.208 (G) 0.05 (G) >1 (-) 0 (-) >0.05
rs6677508 chr1:67742685 RNU4ATAC4P [+9276bp] C - 13 A vs. C - - <1 (-) 27 (-) >0.05
rs2863209 chr1:67733346 RNU4ATAC4P C - 13 A vs. G 0.133 (G) 0.033 (G) <1 (-) 9 (-) >0.05
rs72931025 chr1:67770361 IL12RB2 [-2686bp] C - 11 T vs. C - 0.042 (C) >1 (-) 0 (-) >0.05
rs71639474 chr1:67745398 RNU4ATAC4P [+11989bp] C - 13 T vs. C - - <1 (-) 14 (-) >0.05
rs2101982 chr1:67732030 RNU4ATAC4P [-1254bp] C - 13 T vs. C 0.15 (T) 0.042 (T) >1 (-) 9 (-) >0.05
rs10749775 chr1:67822087 IL12RB2 C - 13 A vs. C 0.192 (C) - <1 (-) 0 (-) >0.05
rs17129789 chr1:67790598 IL12RB2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7547569 chr1:67731368 RNU4ATAC4P [-1916bp] C - 13 T vs. C 0.058 (C) - <1 (-) 0 (-) >0.05
rs17129908 chr1:67839202 IL12RB2 C - 13 A vs. T 0.075 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs139662115 chr1:67725935 IL23R [+273bp] C - 8 C vs. G - - <1 (-) 4 (-) >0.05
rs6665569 chr1:67742121 RNU4ATAC4P [+8712bp] C - 13 T vs. C - - >1 (-) 8 (-) >0.05
rs149798029 chr1:67741884 RNU4ATAC4P [+8475bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11209036 chr1:67749068 RNU4ATAC4P [+15659bp] C - 13 T vs. C 0.45 (T) 0.208 (T) >1 (-) 6 (-) >0.05
rs11209033 chr1:67744500 RNU4ATAC4P [+11091bp] C - 13 C vs. G 0.308 (G) 0.483 (G) <1 (-) 0 (-) >0.05
rs11209051 chr1:67798895 IL12RB2 C - 13 T vs. C 0.25 (C) 0.242 (C) <1 (-) 0 (-) >0.05
rs4655698 chr1:67798327 IL12RB2 C - 13 T vs. G 0.25 (T) 0.242 (T) >1 (-) 0 (-) >0.05
rs140184639 chr1:67757483 IL12RB2 [-15564bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs79866453 chr1:67732512 RNU4ATAC4P [-772bp] C - 13 T vs. C 0.058 (T) - >1 (-) 0 (-) >0.05
rs10889681 chr1:67799170 IL12RB2 C - 13 T vs. C 0.25 (T) 0.225 (T) >1 (-) 0 (-) >0.05
rs2201584 chr1:67787715 IL12RB2 C - 13 A vs. G 0.175 (A) 0.308 (A) <1 (-) 0 (-) >0.05
rs1909129 chr1:67735299 RNU4ATAC4P [+1890bp] C - 13 A vs. G 0.308 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs10159178 chr1:67734398 RNU4ATAC4P [+989bp] C - 13 T vs. C 0.133 (C) 0.042 (C) <1 (-) 11 (-) >0.05
rs4655536 chr1:67757854 IL12RB2 [-15193bp] C - 13 A vs. T - - <1 (-) 14 (-) >0.05
rs113155999 chr1:67743552 RNU4ATAC4P [+10143bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs17129794 chr1:67794918 IL12RB2 C - 13 A vs. C 0.233 (C) 0.05 (C) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.