RNU4ATAC4P, chr1:67733284-67733409 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115917484 chr1:67707321 IL23R C - 10 A vs. G 0.042 (G) - <1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115917484 chr1:67707321 IL23R C - 10 A vs. G 0.042 (G) - <1 (-) 7 (-) <0.05
rs74473089 chr1:67770136 IL12RB2 [-2911bp] C - 7 T vs. C 0.033 (T) - <1 (-) 0 (-) <0.05
rs72678513 chr1:67768863 IL12RB2 [-4184bp] C - 3 A vs. G 0.05 (A) - <1 (-) 0 (-) <0.05
rs72676089 chr1:67692335 C1orf141 C - 10 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs12041187 chr1:67713665 IL23R C - 13 T vs. C - - <1 (-) 30 (-) >0.05
rs150823455 chr1:67745620 RNU4ATAC4P [+12211bp] C - 13 T vs. C - - <1 (-) 41 (-) >0.05
rs72678511 chr1:67740608 RNU4ATAC4P [+7199bp] C - 13 T vs. C 0.033 (T) - <1 (-) 30 (-) >0.05
rs17303361 chr1:67739824 RNU4ATAC4P [+6415bp] C - 13 A vs. G 0.133 (G) - >1 (-) 40 (-) >0.05
rs72678509 chr1:67738452 RNU4ATAC4P [+5043bp] C - 13 T vs. C 0.133 (T) - <1 (-) 40 (-) >0.05
rs113767217 chr1:67725583 IL23R C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs112612764 chr1:67734026 RNU4ATAC4P [+617bp] C - 13 A vs. G 0.133 (A) - <1 (-) 39 (-) >0.05
rs12073833 chr1:67733769 RNU4ATAC4P [+360bp] C - 13 A vs. C - - <1 (-) 39 (-) >0.05
rs72678507 chr1:67735467 RNU4ATAC4P [+2058bp] C - 13 C vs. G 0.133 (G) - >1 (-) 39 (-) >0.05
rs72676102 chr1:67719163 IL23R C - 11 A vs. T 0.017 (A) - <1 (-) 0 (-) >0.05
rs12401825 chr1:67744252 RNU4ATAC4P [+10843bp] C - 13 T vs. C 0.125 (C) - >1 (-) 40 (-) >0.05
rs12073417 chr1:67743533 RNU4ATAC4P [+10124bp] C - 13 T vs. C - - <1 (-) 40 (-) >0.05
rs12406489 chr1:67752848 RNU4ATAC4P [+19439bp] C - 13 T vs. C 0.117 (T) - <1 (-) 40 (-) >0.05
rs114592368 chr1:67732245 RNU4ATAC4P [-1039bp] C - 13 C vs. G 0.133 (G) - >1 (-) 39 (-) >0.05
rs6588252 chr1:67739028 RNU4ATAC4P [+5619bp] C - 13 T vs. G 0.267 (T) 0.208 (T) >1 (-) 53 (-) >0.05
rs6677188 chr1:67740403 RNU4ATAC4P [+6994bp] C - 13 A vs. T 0.267 (A) 0.208 (A) >1 (-) 54 (-) >0.05
rs11209030 chr1:67737775 RNU4ATAC4P [+4366bp] C - 13 A vs. C 0.267 (A) 0.208 (A) >1 (-) 54 (-) >0.05
rs76083397 chr1:67728519 IL23R [+2857bp] C - 13 A vs. G 0.133 (G) 0.183 (G) >1 (-) 34 (-) >0.05
rs11209031 chr1:67739588 RNU4ATAC4P [+6179bp] C - 13 A vs. C 0.267 (C) 0.208 (C) <1 (-) 53 (-) >0.05
rs6693831 chr1:67720867 IL23R C - 13 T vs. C 0.283 (T) 0.225 (T) <1 (-) 26 (-) >0.05
rs11209043 chr1:67767396 IL12RB2 [-5651bp] C - 7 T vs. C 0.425 (C) 0.35 (T) <1 (-) 15 (-) >0.05
rs7542081 chr1:67703253 IL23R C - 13 A vs. C 0.367 (C) 0.208 (C) >1 (-) 33 (-) >0.05
rs57719158 chr1:67733321 RNU4ATAC4P C - 13 A vs. G 0.267 (A) 0.208 (A) >1 (-) 54 (-) >0.05
rs59384635 chr1:67738621 RNU4ATAC4P [+5212bp] C - 13 A vs. T 0.267 (A) 0.208 (A) >1 (-) 52 (-) >0.05
rs11581483 chr1:67697992 IL23R C - 13 T vs. C 0.15 (C) 0.208 (C) >1 (-) 32 (-) >0.05
rs12045232 chr1:67738359 RNU4ATAC4P [+4950bp] C - 13 A vs. T 0.267 (A) 0.208 (A) >1 (-) 52 (-) >0.05
rs790635 chr1:67683486 C1orf141 C - 13 T vs. C 0.242 (T) 0.058 (T) <1 (-) 1 (-) >0.05
rs6682413 chr1:67731614 RNU4ATAC4P [-1670bp] C - 13 A vs. G 0.283 (A) 0.192 (A) >1 (-) 54 (-) >0.05
rs146640891 chr1:67721779 IL23R C - 3 T vs. G - - >1 (-) 0 (-) >0.05
rs6588251 chr1:67706550 IL23R C - 13 T vs. C 0.3 (T) 0.233 (T) <1 (-) 25 (-) >0.05
rs10889679 chr1:67752088 RNU4ATAC4P [+18679bp] C - 13 C vs. G 0.308 (C) 0.208 (C) >1 (-) 40 (-) >0.05
rs75496643 chr1:67722894 IL23R C - 13 A vs. G 0.142 (A) 0.183 (A) <1 (-) 26 (-) >0.05
rs6669582 chr1:67730055 RNU4ATAC4P [-3229bp] C - 13 A vs. G 0.35 (G) 0.075 (G) <1 (-) 50 (-) >0.05
rs114871562 chr1:67703856 IL23R C - 3 A vs. C 0.033 (A) - <1 (-) 63 (-) >0.05
rs113741533 chr1:67689106 C1orf141 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs113860798 chr1:67708911 IL23R C - 13 A vs. G 0.075 (G) - >1 (-) 29 (-) >0.05
rs10889675 chr1:67722216 IL23R C - 13 A vs. C 0.142 (A) 0.183 (A) <1 (-) 26 (-) >0.05
rs4655531 chr1:67727778 IL23R [+2116bp] C - 13 T vs. C 0.133 (T) 0.183 (T) <1 (-) 29 (-) >0.05
rs1343151 chr1:67719129 IL23R C - 13 A vs. G 0.342 (A) 0.083 (A) >1 (-) 52 (-) >0.05
rs7542061 chr1:67765056 IL12RB2 [-7991bp] C - 13 T vs. C - - >1 (-) 39 (-) >0.05
rs1008193 chr1:67719911 IL23R C - 13 C vs. G 0.283 (G) 0.083 (G) <1 (-) 52 (-) >0.05
rs145367048 chr1:67712477 IL23R C - 13 T vs. C - - >1 (-) 21 (-) >0.05
rs2000252 chr1:67727555 IL23R [+1893bp] C - 13 T vs. C 0.283 (T) 0.083 (T) >1 (-) 48 (-) >0.05
rs17129718 chr1:67771184 IL12RB2 [-1863bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs77120660 chr1:67707787 IL23R C - 13 A vs. C 0.142 (A) 0.192 (A) <1 (-) 27 (-) >0.05
rs61779786 chr1:67767099 IL12RB2 [-5948bp] C - 13 T vs. G 0.383 (T) 0.075 (T) <1 (-) 57 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.