INTS2, chr17:59942731-60005377 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113860306 chr17:59942321 INTS2 [-410bp] C - 13 T vs. C - - >1 (-) 10 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113860306 chr17:59942321 INTS2 [-410bp] C - 13 T vs. C - - >1 (-) 10 (-) <0.05
rs74655346 chr17:60046276 MED13 C - 13 C vs. G 0.125 (G) 0.467 (G) <1 (-) 0 (-) <0.05
rs80232901 chr17:60014318 MED13 [-5648bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs4968463 chr17:60032650 MED13 C - 13 A vs. T 0.125 (T) 0.467 (T) <1 (-) 0 (-) <0.05
rs12600620 chr17:60035849 MED13 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs4968461 chr17:60008875 INTS2 [+3498bp] C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs61658218 chr17:60009404 INTS2 [+4027bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs12452094 chr17:60007248 INTS2 [+1871bp] C - 13 A vs. G 0.125 (A) 0.492 (A) >1 (-) 0 (-) <0.05
rs74257577 chr17:60014863 MED13 [-5103bp] C - 13 T vs. C 0.125 (C) 0.45 (C) <1 (-) 0 (-) <0.05
rs12451910 chr17:59950503 INTS2 C - 13 T vs. C 0.133 (C) 0.483 (C) <1 (-) 2 (-) <0.05
rs4968455 chr17:59963779 INTS2 C - 13 A vs. C 0.133 (C) 0.483 (C) <1 (-) 0 (-) <0.05
rs12452742 chr17:59978376 INTS2 C - 13 T vs. C 0.133 (T) 0.492 (T) >1 (-) 0 (-) <0.05
rs73334621 chr17:60008348 INTS2 [+2971bp] C - 13 T vs. C 0.125 (C) 0.5 (C) <1 (-) 0 (-) <0.05
rs75545207 chr17:59979512 INTS2 C - 13 A vs. G 0.133 (A) - >1 (-) 0 (-) <0.05
rs3744434 chr17:59989126 INTS2 C - 13 A vs. C 0.133 (C) 0.492 (C) <1 (-) 0 (-) <0.05
rs16945692 chr17:59940244 BRIP1 C - 13 A vs. G 0.133 (G) 0.483 (G) <1 (-) 0 (-) <0.05
rs112371996 chr17:59987778 INTS2 C - 13 A vs. G 0.133 (A) 0.483 (A) >1 (-) 0 (-) <0.05
rs73332598 chr17:59978724 INTS2 C - 13 T vs. G 0.133 (T) 0.475 (T) >1 (-) 0 (-) <0.05
rs112857769 chr17:59931916 BRIP1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs144519382 chr17:59931903 BRIP1 C - 13 A vs. T - - <1 (-) 0 (-) <0.05
rs4968457 chr17:59969232 INTS2 C - 13 A vs. T 0.133 (T) 0.483 (T) <1 (-) 0 (-) <0.05
rs76301667 chr17:59958263 INTS2 C - 13 T vs. C 0.133 (C) 0.492 (C) <1 (-) 0 (-) <0.05
rs73332565 chr17:59958635 INTS2 C - 13 T vs. G 0.133 (T) 0.475 (T) >1 (-) 0 (-) <0.05
rs75594946 chr17:60046640 MED13 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs56794817 chr17:60001978 INTS2 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs8080599 chr17:59959589 INTS2 C - 13 T vs. C 0.133 (T) 0.483 (T) >1 (-) 0 (-) <0.05
rs77066699 chr17:59999390 INTS2 C - 13 T vs. C 0.133 (C) 0.492 (T) <1 (-) 0 (-) <0.05
rs4968460 chr17:59995992 INTS2 C - 13 A vs. G 0.133 (G) 0.475 (G) <1 (-) 0 (-) <0.05
rs74889019 chr17:59992428 INTS2 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs58624595 chr17:59977174 INTS2 C - 13 A vs. G 0.133 (G) 0.483 (G) <1 (-) 0 (-) <0.05
rs12600909 chr17:59972171 INTS2 C - 13 T vs. C 0.142 (C) 0.5 (C) <1 (-) 0 (-) <0.05
rs141825893 chr17:59971982 INTS2 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs9630735 chr17:59943704 INTS2 C - 13 C vs. G 0.142 (C) 0.45 (C) >1 (-) 0 (-) <0.05
rs144205468 chr17:60000649 INTS2 C - 13 T vs. C - - <1 (-) 2 (-) <0.05
rs61169879 chr17:59917366 BRIP1 C - 13 T vs. C 0.133 (T) 0.492 (C) >1 (-) 0 (-) <0.05
rs4968452 chr17:59934879 BRIP1 C - 13 C vs. G - - >1 (-) 0 (-) <0.05
rs4968451 chr17:59927307 BRIP1 C - 13 A vs. C 0.133 (C) 0.5 (C) <1 (-) 0 (-) <0.05
rs4968408 chr17:59963911 INTS2 C - 13 T vs. C 0.133 (T) 0.483 (T) >1 (-) 0 (-) <0.05
rs4968454 chr17:59963717 INTS2 C - 13 A vs. G 0.133 (A) 0.492 (A) >1 (-) 0 (-) <0.05
rs147390144 chr17:59992897 INTS2 C - 13 A vs. C - - <1 (-) 0 (-) <0.05
rs4988344 chr17:59924612 BRIP1 C - 13 C vs. G 0.133 (C) 0.5 (C) >1 (-) 0 (-) <0.05
rs12452732 chr17:59978173 INTS2 C - 13 C vs. G 0.133 (C) 0.492 (C) >1 (-) 0 (-) <0.05
rs8081917 chr17:59975372 INTS2 C - 13 T vs. C 0.133 (C) 0.492 (C) <1 (-) 0 (-) <0.05
rs76968034 chr17:59958148 INTS2 C - 13 C vs. G 0.133 (C) 0.475 (C) >1 (-) 5 (-) <0.05
rs4968456 chr17:59964699 INTS2 C - 13 T vs. C 0.133 (C) 0.483 (C) <1 (-) 0 (-) <0.05
rs74419252 chr17:59922925 BRIP1 C - 13 T vs. C 0.133 (C) 0.5 (C) <1 (-) 0 (-) <0.05
rs76468620 chr17:59918091 BRIP1 C - 13 A vs. G 0.133 (G) 0.5 (G) <1 (-) 0 (-) <0.05
rs56086040 chr17:60049236 MED13 C - 13 A vs. G 0.1 (A) - <1 (-) 0 (-) <0.05
rs12604037 chr17:60013554 MED13 [-6412bp] C - 13 T vs. C 0.125 (C) 0.458 (C) <1 (-) 0 (-) <0.05
rs2278813 chr17:60039995 MED13 C - 13 A vs. G 0.167 (G) 0.05 (G) >1 (-) 0 (-) <0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.