INTS2, chr17:59942731-60005377 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113860306 chr17:59942321 INTS2 [-410bp] C - 13 T vs. C - - >1 (-) 10 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2271576 chr17:59967387 INTS2 C - 13 T vs. C 0.133 (C) 0.5 (C) <1 (-) 2 (-) <0.05
rs75650002 chr17:59989881 INTS2 C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs79006093 chr17:59962789 INTS2 C - 13 T vs. C 0.117 (C) - <1 (-) 1 (-) <0.05
rs79518898 chr17:60009914 INTS2 [+4537bp] C - 13 T vs. C 0.108 (T) 0.475 (T) >1 (-) 0 (-) <0.05
rs6504077 chr17:60048474 MED13 C - 13 A vs. T 0.158 (A) 0.242 (T) >1 (-) 0 (-) <0.05
rs11079459 chr17:60013227 MED13 [-6739bp] C - 13 A vs. C 0.108 (A) 0.408 (A) >1 (-) 0 (-) <0.05
rs12601269 chr17:59899199 BRIP1 C - 13 A vs. G 0.125 (A) 0.442 (G) >1 (-) 0 (-) <0.05
rs12453644 chr17:59900357 BRIP1 C - 13 T vs. C 0.133 (C) 0.417 (T) <1 (-) 0 (-) <0.05
rs74839037 chr17:59913782 BRIP1 C - 13 T vs. C 0.133 (T) 0.45 (C) >1 (-) 0 (-) <0.05
rs7218545 chr17:60037150 MED13 C - 13 T vs. C 0.158 (C) 0.25 (T) <1 (-) 0 (-) <0.05
rs2378908 chr17:59911765 BRIP1 C - 13 A vs. G 0.133 (A) 0.45 (G) >1 (-) 0 (-) <0.05
rs73332580 chr17:59968621 INTS2 C - 13 T vs. C - - <1 (-) 12 (-) <0.05
rs75723845 chr17:59911200 BRIP1 C - 13 A vs. G 0.133 (A) 0.458 (G) >1 (-) 0 (-) <0.05
rs8081805 chr17:60042254 MED13 C - 13 A vs. G 0.158 (G) 0.258 (A) <1 (-) 0 (-) <0.05
rs9901321 chr17:60015103 MED13 [-4863bp] C - 13 T vs. C 0.158 (T) - >1 (-) 0 (-) <0.05
rs141635882 chr17:59987944 INTS2 C - 13 A vs. C - - <1 (-) 0 (-) <0.05
rs111914580 chr17:60011133 INTS2 [+5756bp] C - 13 T vs. C - - <1 (-) 7 (-) <0.05
rs117857005 chr17:60011157 INTS2 [+5780bp] C - 13 T vs. C - 0.475 (C) <1 (-) 7 (-) <0.05
rs11656805 chr17:59985690 INTS2 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs72843757 chr17:59982085 INTS2 C - 13 A vs. G 0.167 (A) 0.05 (A) <1 (-) 0 (-) <0.05
rs72843752 chr17:59974217 INTS2 C - 13 A vs. C 0.167 (A) 0.033 (A) <1 (-) 0 (-) <0.05
rs140688630 chr17:59970907 INTS2 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs4968453 chr17:59955887 INTS2 C - 13 T vs. C 0.158 (T) 0.042 (T) <1 (-) 0 (-) <0.05
rs28867137 chr17:59992775 INTS2 C - 13 A vs. T 0.167 (T) - <1 (-) 0 (-) <0.05
rs4968464 chr17:60039539 MED13 C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs56267713 chr17:59959546 INTS2 C - 13 A vs. C 0.167 (C) 0.05 (C) >1 (-) 0 (-) <0.05
rs2278812 chr17:60040329 MED13 C - 13 T vs. C 0.092 (T) 0.467 (T) >1 (-) 0 (-) <0.05
rs80156789 chr17:59932697 BRIP1 C - 11 C vs. G 0.025 (C) 0.492 (G) >1 (-) 17 (-) <0.05
rs4968462 chr17:60019012 MED13 [-954bp] C - 13 A vs. G 0.092 (A) 0.475 (A) >1 (-) 0 (-) <0.05
rs7207787 chr17:59993746 INTS2 C - 13 A vs. G 0.167 (A) 0.225 (G) >1 (-) 0 (-) <0.05
rs8077835 chr17:59971067 INTS2 C - 13 A vs. T 0.2 (T) 0.325 (T) >1 (-) 0 (-) <0.05
rs72843735 chr17:59934862 BRIP1 C - 13 A vs. G 0.167 (G) 0.058 (G) >1 (-) 0 (-) <0.05
rs56294609 chr17:59933432 BRIP1 C - 13 T vs. G 0.158 (T) 0.083 (T) <1 (-) 0 (-) <0.05
rs8075585 chr17:59949487 INTS2 C - 13 A vs. T 0.167 (A) 0.033 (A) <1 (-) 0 (-) <0.05
rs2014444 chr17:59967940 INTS2 C - 13 T vs. C 0.2 (T) 0.325 (T) <1 (-) 0 (-) <0.05
rs147122826 chr17:59923466 BRIP1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs12452044 chr17:59919361 BRIP1 C - 13 T vs. C 0.158 (T) 0.058 (T) <1 (-) 0 (-) <0.05
rs72843728 chr17:59917389 BRIP1 C - 13 T vs. C 0.167 (T) - <1 (-) 0 (-) <0.05
rs2066962 chr17:59916524 BRIP1 C - 13 A vs. T 0.158 (A) 0.042 (A) <1 (-) 0 (-) <0.05
rs17614124 chr17:59916024 BRIP1 C - 13 T vs. C 0.158 (T) 0.033 (T) <1 (-) 0 (-) <0.05
rs10515212 chr17:59914915 BRIP1 C - 13 A vs. G 0.167 (G) 0.058 (G) >1 (-) 0 (-) <0.05
rs149668316 chr17:59915799 BRIP1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs58426748 chr17:59901454 BRIP1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs4988340 chr17:59940633 BRIP1 C - 13 T vs. C 0.2 (T) 0.342 (T) <1 (-) 0 (-) <0.05
rs12452396 chr17:59898760 BRIP1 C - 13 T vs. C 0.167 (C) - >1 (-) 0 (-) <0.05
rs9902812 chr17:59999909 INTS2 C - 13 A vs. G 0.175 (A) - >1 (-) 0 (-) <0.05
rs11652477 chr17:59899840 BRIP1 C - 13 A vs. G 0.167 (A) 0.058 (A) <1 (-) 0 (-) <0.05
rs17542001 chr17:59915590 BRIP1 C - 13 T vs. C 0.167 (C) 0.058 (C) >1 (-) 0 (-) <0.05
rs72843731 chr17:59920876 BRIP1 C - 13 T vs. G 0.167 (T) 0.058 (T) <1 (-) 0 (-) <0.05
rs56391142 chr17:59913566 BRIP1 C - 13 A vs. G 0.142 (A) 0.058 (A) <1 (-) 0 (-) <0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.