INTS2, chr17:59942731-60005377 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113860306 chr17:59942321 INTS2 [-410bp] C - 13 T vs. C - - >1 (-) 10 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs150070187 chr17:60035383 MED13 C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs72843763 chr17:60015988 MED13 [-3978bp] C - 11 A vs. G 0.042 (G) - >1 (-) 0 (-) >0.05
rs12941152 chr17:59984052 INTS2 C - 13 A vs. C 0.208 (C) - >1 (-) 0 (-) >0.05
rs72843765 chr17:60030874 MED13 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs149572796 chr17:59967874 INTS2 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs8067244 chr17:59902554 BRIP1 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs17614694 chr17:60018875 MED13 [-1091bp] C - 13 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs111848284 chr17:59965596 INTS2 C - 12 T vs. C 0.242 (C) - <1 (-) 28 (-) >0.05
rs12938171 chr17:59980355 INTS2 C - 4 A vs. G - - >1 (-) 60 (-) >0.05
rs7217730 chr17:59900024 BRIP1 C - 13 C vs. G 0.467 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs62068839 chr17:59907357 BRIP1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs62068842 chr17:59917864 BRIP1 C - 13 A vs. G 0.467 (A) 0.108 (A) >1 (-) 2 (-) >0.05
rs112112762 chr17:59908177 BRIP1 C - 11 A vs. C - - >1 (-) 33 (-) >0.05
rs9908659 chr17:59924862 BRIP1 C - 13 T vs. C 0.467 (C) 0.117 (C) <1 (-) 2 (-) >0.05
rs9915965 chr17:59925652 BRIP1 C - 13 T vs. C 0.467 (C) 0.117 (C) <1 (-) 2 (-) >0.05
rs7219969 chr17:59935723 BRIP1 C - 13 T vs. C 0.45 (C) 0.142 (C) <1 (-) 0 (-) >0.05
rs7223243 chr17:59911799 BRIP1 C - 13 A vs. G 0.442 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs72843708 chr17:59901717 BRIP1 C - 13 A vs. C - 0.242 (A) >1 (-) 0 (-) >0.05
rs72843756 chr17:59977684 INTS2 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs77352102 chr17:59999972 INTS2 C - 3 T vs. C - 0.083 (C) >1 (-) 0 (-) >0.05
rs145797181 chr17:59911001 BRIP1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs141168270 chr17:60048953 MED13 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs114618387 chr17:59926702 BRIP1 C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs111230142 chr17:59898706 BRIP1 C - 9 A vs. G 0.025 (A) - <1 (-) 16 (-) >0.05
rs16945665 chr17:59911493 BRIP1 C - 13 A vs. G 0.017 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs112555629 chr17:59980973 INTS2 C - 10 T vs. C - - >1 (-) 41 (-) >0.05
rs12602937 chr17:59932892 BRIP1 C - 13 A vs. G 0.333 (A) - >1 (-) 0 (-) >0.05
rs11079458 chr17:59966741 INTS2 C - 13 A vs. T 0.333 (T) 0.175 (A) <1 (-) 0 (-) >0.05
rs117543153 chr17:59921372 BRIP1 C - 5 A vs. G 0.008 (G) - <1 (-) 21 (-) >0.05
rs2048718 chr17:59940819 BRIP1 C - 13 T vs. C 0.333 (T) 0.183 (C) >1 (-) 0 (-) >0.05
rs9890526 chr17:59962720 INTS2 C - 13 T vs. C 0.333 (C) 0.175 (T) <1 (-) 0 (-) >0.05
rs56110140 chr17:59990314 INTS2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs117622721 chr17:59895975 BRIP1 C - 4 A vs. G 0.008 (G) - <1 (-) 53 (-) >0.05
rs8067092 chr17:59960417 INTS2 C - 13 T vs. C 0.333 (T) 0.175 (C) >1 (-) 0 (-) >0.05
rs72843743 chr17:59954530 INTS2 C - 13 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs76309575 chr17:59921194 BRIP1 C - 13 A vs. G 0.017 (A) 0.292 (A) >1 (-) 0 (-) >0.05
rs8073307 chr17:59970515 INTS2 C - 13 A vs. G 0.333 (G) 0.175 (A) <1 (-) 0 (-) >0.05
rs72843772 chr17:60050434 MED13 C - 13 T vs. G 0.033 (G) 0.242 (G) <1 (-) 0 (-) >0.05
rs10512491 chr17:60045295 MED13 C - 13 T vs. C 0.033 (T) 0.275 (T) >1 (-) 0 (-) >0.05
rs71375125 chr17:60000786 INTS2 C - 4 T vs. C - - >1 (-) 32 (-) >0.05
rs7215076 chr17:59943532 INTS2 C - 13 T vs. C 0.333 (C) - <1 (-) 0 (-) >0.05
rs72843769 chr17:60034233 MED13 C - 13 C vs. G 0.033 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs139528270 chr17:59988503 INTS2 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs117077613 chr17:59931854 BRIP1 C - 13 T vs. C 0.008 (T) - >1 (-) 37 (-) >0.05
rs112358329 chr17:59976077 INTS2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs72843767 chr17:60032075 MED13 C - 13 T vs. C 0.033 (T) 0.275 (T) >1 (-) 0 (-) >0.05
rs147732419 chr17:59932612 BRIP1 C - 13 T vs. G - - <1 (-) 35 (-) >0.05
rs72843762 chr17:60010624 INTS2 [+5247bp] C - 13 A vs. G 0.033 (A) 0.267 (A) >1 (-) 0 (-) >0.05
rs112105155 chr17:60009594 INTS2 [+4217bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12937188 chr17:60003098 INTS2 C - 13 T vs. C 0.025 (T) 0.3 (T) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.