JSRP1, chr19:2252251-2269758 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
Meta_image?name=rs117022814

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs73518468 chr19:2300419 LINGO3 C - 5 A vs. T 0.033 (A) 0.2 (A) >1 (-) 52 (-) >0.05
rs75389527 chr19:2243066 SF3A2 C - 11 A vs. G 0.025 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs2074552 chr19:2214057 DOT1L C - 12 T vs. C 0.35 (C) 0.45 (C) >1 (-) 0 (-) >0.05
rs55662626 chr19:2280885 C19orf35 C - 8 A vs. G 0.067 (A) 0.225 (A) >1 (-) 5 (-) >0.05
rs117554820 chr19:2225110 DOT1L C - 11 T vs. C 0.042 (T) - <1 (-) 50 (-) >0.05
rs6510657 chr19:2300886 LINGO3 C - 5 T vs. C 0.075 (T) 0.2 (T) >1 (-) 56 (-) >0.05
rs116548172 chr19:2245457 SF3A2 C - 11 A vs. G 0.042 (G) - >1 (-) 13 (-) >0.05
rs56233360 chr19:2309069 LINGO3 [+913bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs117275725 chr19:2315607 LSM7 [-5909bp] C - 5 T vs. G 0.033 (T) - >1 (-) 46 (-) >0.05
rs4807215 chr19:2204693 DOT1L C - 12 T vs. C 0.492 (T) 0.458 (T) >1 (-) 13 (-) >0.05
rs45539635 chr19:2244646 SF3A2 C - 11 T vs. C - - <1 (-) 23 (-) >0.05
rs12983678 chr19:2207269 DOT1L C - 12 A vs. G 0.5 (G) 0.467 (A) >1 (-) 17 (-) >0.05
rs77542691 chr19:2247733 SF3A2 C - 8 T vs. C 0.008 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs3761018 chr19:2248882 SF3A2 [+204bp] C - 8 A vs. G - 0.083 (G) >1 (-) 0 (-) >0.05
rs10406324 chr19:2249112 AMH [-196bp] C - 9 A vs. G 0.042 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs12460882 chr19:2278509 C19orf35 C - 11 T vs. C 0.067 (C) 0.275 (C) <1 (-) 0 (-) >0.05
rs78048915 chr19:2278508 C19orf35 C - 11 A vs. G 0.067 (G) 0.275 (G) <1 (-) 0 (-) >0.05
rs117904838 chr19:2220894 DOT1L C - 11 T vs. G 0.042 (T) - <1 (-) 15 (-) >0.05
rs141523228 chr19:2217023 DOT1L C - 11 T vs. C - - >1 (-) 30 (-) >0.05
rs61736572 chr19:2249583 AMH C - 8 A vs. G - 0.083 (A) <1 (-) 0 (-) >0.05
rs79670723 chr19:2219570 DOT1L C - 11 A vs. G 0.042 (A) - <1 (-) 12 (-) >0.05
rs77068163 chr19:2215941 DOT1L C - 11 T vs. C 0.042 (T) - <1 (-) 11 (-) >0.05
rs61736575 chr19:2249634 AMH C - 8 A vs. G 0.025 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs12460460 chr19:2280450 C19orf35 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs12460315 chr19:2280469 C19orf35 C - 11 A vs. G 0.025 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs12460495 chr19:2280649 C19orf35 C - 11 T vs. C 0.042 (T) 0.242 (T) >1 (-) 0 (-) >0.05
rs77833359 chr19:2279695 C19orf35 C - 11 A vs. G - 0.275 (G) <1 (-) 0 (-) >0.05
rs77825851 chr19:2207386 DOT1L C - 11 C vs. G 0.025 (C) - >1 (-) 37 (-) >0.05
rs148457017 chr19:2309966 LINGO3 [+1810bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs73516539 chr19:2239907 SF3A2 C - 10 A vs. T - 0.108 (A) >1 (-) 48 (-) >0.05
rs113116376 chr19:2312386 LINGO3 [+4230bp] C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs2159025 chr19:2318944 LSM7 [-2572bp] C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs1971003 chr19:2318819 LSM7 [-2697bp] C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs1609704 chr19:2318455 LSM7 [-3061bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs35792872 chr19:2206163 DOT1L C - 12 A vs. G - 0.475 (G) <1 (-) 0 (-) >0.05
rs740405 chr19:2232220 DOT1L C - 11 A vs. C - 0.217 (C) >1 (-) 46 (-) >0.05
rs740406 chr19:2232221 DOT1L C - 11 A vs. G - 0.225 (G) >1 (-) 46 (-) >0.05
rs12462556 chr19:2221792 DOT1L C - 11 T vs. C 0.142 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs36064137 chr19:2277915 C19orf35 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs77671243 chr19:2250236 AMH C - 8 A vs. G - 0.075 (A) <1 (-) 0 (-) >0.05
rs7249235 chr19:2242829 SF3A2 C - 11 A vs. C 0.067 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs12459954 chr19:2274864 C19orf35 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs34658798 chr19:2278391 C19orf35 C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs4807222 chr19:2308344 LINGO3 [+188bp] C - 11 T vs. C - 0.217 (T) <1 (-) 49 (-) >0.05
rs4806833 chr19:2246403 SF3A2 C - 11 A vs. G 0.075 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs757595 chr19:2241406 SF3A2 C - 11 T vs. C 0.067 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs2041112 chr19:2240406 SF3A2 C - 11 C vs. G 0.067 (C) 0.242 (C) <1 (-) 0 (-) >0.05
rs61297982 chr19:2241143 SF3A2 C - 10 A vs. G - 0.083 (G) <1 (-) 46 (-) >0.05
rs3761021 chr19:2241052 SF3A2 C - 10 A vs. G - 0.108 (G) <1 (-) 46 (-) >0.05
rs60012971 chr19:2241127 SF3A2 C - 10 A vs. G - 0.117 (A) >1 (-) 46 (-) >0.05

Association studies for this region [+]