LCT, chr2:136545410-136594750 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4988235 chr2:136608646 MCM6 All: C 108,544 14 G vs. A 0.225 (G) - 0.89 (0.86-0.93) 0 (0-49) 7.41e-09
Meta_image?name=rs4988235

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs143747282 chr2:136577346 LCT C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs3754691 chr2:136577717 LCT C - 6 T vs. C - 0.092 (C) >1 (-) 0 (-) >0.05
rs4988173 chr2:136624382 MCM6 C - 13 T vs. C - 0.075 (T) <1 (-) 0 (-) >0.05
rs141917101 chr2:136598550 MCM6 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs151158435 chr2:136596592 MCM6 [-604bp] C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs62170082 chr2:136532394 UBXN4 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs4988172 chr2:136624686 MCM6 C - 13 C vs. G - 0.067 (G) >1 (-) 0 (-) >0.05
rs139851382 chr2:136525090 UBXN4 C - 9 T vs. C - - <1 (-) 20 (-) >0.05
rs149376908 chr2:136644124 MCM6 [+10128bp] C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs4988257 chr2:136604610 MCM6 C - 13 A vs. C - 0.033 (C) >1 (-) 0 (-) >0.05
rs62170077 chr2:136502180 UBXN4 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs142420254 chr2:136571831 LCT C - 4 T vs. C - - >1 (-) 50 (-) >0.05
rs144541453 chr2:136580788 LCT C - 3 A vs. C - - <1 (-) 0 (-) >0.05
rs138280334 chr2:136523057 UBXN4 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs140478844 chr2:136582925 LCT C - 9 A vs. G - - <1 (-) 20 (-) >0.05
rs145794596 chr2:136502620 UBXN4 C - 10 C vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]