LRRC38, chr1:13801445-13840543 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10927560 chr1:13776368 LRRC38 [-25077bp] C - 11 T vs. C - - <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10927560 chr1:13776368 LRRC38 [-25077bp] C - 11 T vs. C - - <1 (-) 0 (-) <0.05
rs11585835 chr1:13806585 LRRC38 C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs12738858 chr1:13862675 LRRC38 [+22132bp] C - 13 C vs. G 0.083 (G) - <1 (-) 7 (-) <0.05
rs376251 chr1:13815757 LRRC38 C - 12 A vs. G 0.408 (G) 0.1 (A) <1 (-) 18 (-) <0.05
rs164949 chr1:13820451 LRRC38 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs3013044 chr1:13812568 LRRC38 C - 13 A vs. T - - <1 (-) 11 (-) <0.05
rs10803381 chr1:13827439 LRRC38 C - 12 A vs. G 0.042 (A) 0.025 (A) >1 (-) 0 (-) <0.05
rs610136 chr1:13817350 LRRC38 C - 13 A vs. G 0.292 (G) 0.333 (G) <1 (-) 0 (-) >0.05
rs591723 chr1:13816632 LRRC38 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs71629831 chr1:13822261 LRRC38 C - 12 A vs. G 0.1 (A) - >1 (-) 0 (-) >0.05
rs381599 chr1:13814373 LRRC38 C - 13 A vs. C 0.3 (A) 0.325 (A) >1 (-) 7 (-) >0.05
rs12024867 chr1:13843661 LRRC38 [+3118bp] C - 4 A vs. C - 0.067 (A) <1 (-) 0 (-) >0.05
rs36004072 chr1:13831910 LRRC38 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs10927768 chr1:13824155 LRRC38 C - 12 T vs. C 0.05 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs2924851 chr1:13816076 LRRC38 C - 13 A vs. G 0.292 (A) 0.333 (A) >1 (-) 4 (-) >0.05
rs3013045 chr1:13816121 LRRC38 C - 13 A vs. G 0.283 (G) 0.333 (G) <1 (-) 3 (-) >0.05
rs2924850 chr1:13816131 LRRC38 C - 13 A vs. G 0.292 (A) 0.333 (A) >1 (-) 3 (-) >0.05
rs10927711 chr1:13812506 LRRC38 C - 13 T vs. C - - <1 (-) 4 (-) >0.05
rs7529845 chr1:13887480 PDPN [-22480bp] C - 13 A vs. G - - >1 (-) 2 (-) >0.05
rs77108975 chr1:13890203 PDPN [-19757bp] C - 10 T vs. G - - <1 (-) 0 (-) >0.05
rs10927850 chr1:13868928 LRRC38 [+28385bp] C - 13 C vs. G 0.475 (C) 0.342 (G) >1 (-) 0 (-) >0.05
rs355011 chr1:13868148 LRRC38 [+27605bp] C - 13 A vs. G 0.475 (G) 0.333 (A) <1 (-) 0 (-) >0.05
rs354568 chr1:13861660 LRRC38 [+21117bp] C - 5 T vs. C - 0.075 (C) >1 (-) 0 (-) >0.05
rs72866330 chr1:13825343 LRRC38 C - 9 A vs. C - 0.267 (C) <1 (-) 0 (-) >0.05
rs6693800 chr1:13858809 LRRC38 [+18266bp] C - 13 A vs. T 0.483 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs7530115 chr1:13887751 PDPN [-22209bp] C - 13 T vs. G - - >1 (-) 10 (-) >0.05
rs45223 chr1:13844562 LRRC38 [+4019bp] C - 13 A vs. G 0.458 (A) 0.375 (G) >1 (-) 8 (-) >0.05
rs138795741 chr1:13831967 LRRC38 C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs34866970 chr1:13888716 PDPN [-21244bp] C - 13 A vs. G 0.083 (G) 0.042 (G) <1 (-) 15 (-) >0.05
rs13375580 chr1:13875896 PDPN [-34064bp] C - 13 C vs. G 0.475 (C) 0.317 (C) <1 (-) 0 (-) >0.05
rs410922 chr1:13847665 LRRC38 [+7122bp] C - 13 T vs. C 0.467 (T) 0.225 (T) <1 (-) 20 (-) >0.05
rs4400601 chr1:13848104 LRRC38 [+7561bp] C - 13 A vs. G 0.467 (G) 0.225 (G) >1 (-) 20 (-) >0.05
rs10927795 chr1:13846199 LRRC38 [+5656bp] C - 13 T vs. C - - <1 (-) 21 (-) >0.05
rs4661595 chr1:13811787 LRRC38 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs79300502 chr1:13846461 LRRC38 [+5918bp] C - 3 T vs. C 0.042 (C) - <1 (-) 30 (-) >0.05
rs10803367 chr1:13815041 LRRC38 C - 13 A vs. T 0.167 (A) 0.267 (A) >1 (-) 0 (-) >0.05
rs59892650 chr1:13812064 LRRC38 C - 13 A vs. G 0.167 (A) 0.267 (A) >1 (-) 0 (-) >0.05
rs150743671 chr1:13873209 LRRC38 [+32666bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs74226256 chr1:13888798 PDPN [-21162bp] C - 13 T vs. C - 0.175 (C) >1 (-) 38 (-) >0.05
rs11580389 chr1:13776251 LRRC38 [-25194bp] C - 8 A vs. G - - >1 (-) 33 (-) >0.05
rs6680362 chr1:13814103 LRRC38 C - 13 A vs. G 0.167 (G) 0.258 (G) <1 (-) 0 (-) >0.05
rs10927854 chr1:13872988 LRRC38 [+32445bp] C - 13 T vs. C 0.492 (T) 0.175 (T) <1 (-) 27 (-) >0.05
rs6429775 chr1:13869642 LRRC38 [+29099bp] C - 13 A vs. C - - <1 (-) 19 (-) >0.05
rs60569513 chr1:13811894 LRRC38 C - 13 A vs. G 0.142 (A) 0.267 (A) >1 (-) 0 (-) >0.05
rs424296 chr1:13845032 LRRC38 [+4489bp] C - 13 A vs. G 0.458 (A) 0.233 (A) <1 (-) 19 (-) >0.05
rs375996 chr1:13815792 LRRC38 C - 13 A vs. G 0.15 (G) 0.267 (G) <1 (-) 0 (-) >0.05
rs4661643 chr1:13859763 LRRC38 [+19220bp] C - 13 T vs. G 0.475 (T) 0.225 (T) <1 (-) 11 (-) >0.05
rs35164922 chr1:13888311 PDPN [-21649bp] C - 13 T vs. G 0.092 (G) - <1 (-) 22 (-) >0.05
rs2990678 chr1:13837213 LRRC38 C - 13 T vs. C 0.375 (T) 0.292 (C) <1 (-) 0 (-) >0.05
rs4661347 chr1:13889781 PDPN [-20179bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.