LRRC42, chr1:54411750-54433841 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7548146 chr1:54450192 LRRC42 [+16351bp] C - 13 T vs. C - - >1 (-) 40 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7548146 chr1:54450192 LRRC42 [+16351bp] C - 13 T vs. C - - >1 (-) 40 (-) <0.05
rs140591470 chr1:54366234 DIO1 C - 4 A vs. G - - >1 (-) 0 (-) <0.05
rs77215788 chr1:54426758 LRRC42 C - 11 T vs. C 0.008 (C) - >1 (-) 0 (-) <0.05
rs144999424 chr1:54365194 DIO1 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs10443230 chr1:54463737 LDLRAD1 [-10675bp] C - 13 A vs. C 0.192 (A) 0.158 (A) >1 (-) 0 (-) <0.05
rs12033572 chr1:54369674 DIO1 C - 13 C vs. G 0.058 (C) 0.033 (C) >1 (-) 31 (-) <0.05
rs7515148 chr1:54369261 DIO1 C - 13 T vs. C - - >1 (-) 31 (-) <0.05
rs12144251 chr1:54440345 LRRC42 [+6504bp] C - 13 A vs. C 0.217 (C) 0.2 (C) <1 (-) 0 (-) <0.05
rs4927043 chr1:54366599 DIO1 C - 13 A vs. G 0.042 (A) 0.0 (A) >1 (-) 22 (-) >0.05
rs146980201 chr1:54391040 HSPB11 C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs114350854 chr1:54379366 DIO1 [+2607bp] C - 7 A vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs146649554 chr1:54468943 LDLRAD1 [-5469bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs144885969 chr1:54377136 DIO1 [+377bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs114888590 chr1:54377061 DIO1 [+302bp] C - 11 A vs. G 0.042 (G) - <1 (-) 29 (-) >0.05
rs7541876 chr1:54363897 DIO1 C - 13 C vs. G 0.492 (C) 0.133 (C) >1 (-) 31 (-) >0.05
rs11582167 chr1:54363076 DIO1 C - 13 A vs. G - - >1 (-) 29 (-) >0.05
rs6588500 chr1:54465617 LDLRAD1 [-8795bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs34684081 chr1:54363750 DIO1 C - 13 T vs. C 0.05 (T) 0.083 (T) >1 (-) 27 (-) >0.05
rs2268185 chr1:54362193 DIO1 C - 13 T vs. G 0.058 (G) 0.067 (G) <1 (-) 27 (-) >0.05
rs10888817 chr1:54362947 DIO1 C - 13 A vs. G - - >1 (-) 18 (-) >0.05
rs34779808 chr1:54382357 HSPB11 C - 13 C vs. G 0.175 (G) - <1 (-) 0 (-) >0.05
rs4475694 chr1:54442907 LRRC42 [+9066bp] C - 13 A vs. G - - >1 (-) 6 (-) >0.05
rs61774859 chr1:54465945 LDLRAD1 [-8467bp] C - 7 T vs. C 0.042 (T) - <1 (-) 0 (-) >0.05
rs76114672 chr1:54379443 DIO1 [+2684bp] C - 13 C vs. G 0.067 (G) - <1 (-) 40 (-) >0.05
rs12083224 chr1:54380900 HSPB11 [-1347bp] C - 13 A vs. G 0.067 (A) - >1 (-) 39 (-) >0.05
rs113876827 chr1:54413516 LRRC42 C - 13 T vs. C 0.033 (T) - >1 (-) 15 (-) >0.05
rs12080485 chr1:54373528 DIO1 C - 13 A vs. G - - >1 (-) 39 (-) >0.05
rs12728734 chr1:54390466 HSPB11 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs115263084 chr1:54383336 HSPB11 C - 13 T vs. C 0.067 (T) - >1 (-) 44 (-) >0.05
rs79641222 chr1:54437952 LRRC42 [+4111bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs77840912 chr1:54408551 HSPB11 C - 13 T vs. C 0.033 (T) - >1 (-) 27 (-) >0.05
rs11206246 chr1:54378026 DIO1 [+1267bp] C - 13 T vs. C 0.067 (C) - <1 (-) 48 (-) >0.05
rs12063019 chr1:54393004 HSPB11 C - 13 A vs. G 0.067 (G) - <1 (-) 42 (-) >0.05
rs79800104 chr1:54399825 HSPB11 C - 13 T vs. C 0.067 (T) - >1 (-) 42 (-) >0.05
rs11206255 chr1:54400627 HSPB11 C - 13 A vs. G 0.067 (A) - >1 (-) 41 (-) >0.05
rs6697447 chr1:54446927 LRRC42 [+13086bp] C - 13 T vs. C 0.033 (T) 0.0 (T) >1 (-) 16 (-) >0.05
rs148850734 chr1:54401968 HSPB11 C - 12 C vs. G - - <1 (-) 8 (-) >0.05
rs12095080 chr1:54376730 DIO1 C - 13 A vs. G 0.067 (G) - <1 (-) 44 (-) >0.05
rs72664107 chr1:54456325 LDLRAD1 [-18087bp] C - 13 A vs. C 0.075 (C) - <1 (-) 0 (-) >0.05
rs17109582 chr1:54375348 DIO1 C - 13 T vs. C 0.067 (C) - <1 (-) 43 (-) >0.05
rs11206256 chr1:54400674 HSPB11 C - 13 A vs. G 0.067 (G) - <1 (-) 40 (-) >0.05
rs79221870 chr1:54384502 HSPB11 C - 13 T vs. C 0.067 (T) - >1 (-) 44 (-) >0.05
rs11206245 chr1:54377977 DIO1 [+1218bp] C - 13 T vs. C 0.067 (C) - <1 (-) 47 (-) >0.05
rs12084242 chr1:54372124 DIO1 C - 13 A vs. T 0.067 (A) - >1 (-) 40 (-) >0.05
rs150256195 chr1:54401897 HSPB11 C - 12 A vs. G - - >1 (-) 8 (-) >0.05
rs12080377 chr1:54373323 DIO1 C - 13 A vs. G - - >1 (-) 41 (-) >0.05
rs1014722 chr1:54380172 HSPB11 [-2075bp] C - 13 T vs. C 0.067 (T) - >1 (-) 38 (-) >0.05
rs7521654 chr1:54364755 DIO1 C - 13 A vs. G 0.058 (A) 0.075 (A) >1 (-) 28 (-) >0.05
rs111491582 chr1:54482820 LDLRAD1 C - 13 T vs. C - 0.033 (T) <1 (-) 11 (-) >0.05
rs11804837 chr1:54482915 LDLRAD1 C - 13 A vs. G 0.392 (A) 0.3 (G) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.