MCM6, chr2:136597196-136633996 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4988235 chr2:136608646 MCM6 All: C 108,544 14 G vs. A 0.225 (G) - 0.89 (0.86-0.93) 0 (0-49) 7.41e-09
Meta_image?name=rs4988235

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3098104 chr2:136672678 DARS C - 12 A vs. T 0.1 (A) 0.133 (A) <1 (-) 0 (-) <0.05
rs12474093 chr2:136617477 MCM6 C - 12 A vs. G - - <1 (-) 0 (-) <0.05
rs111837148 chr2:136612036 MCM6 C - 12 A vs. G 0.117 (A) 0.108 (A) <1 (-) 0 (-) <0.05
rs12475516 chr2:136560761 LCT C - 12 C vs. G 0.117 (G) 0.158 (G) >1 (-) 0 (-) <0.05
rs2304371 chr2:136561557 LCT C - 12 A vs. G 0.117 (G) 0.158 (G) >1 (-) 0 (-) <0.05
rs56100046 chr2:136672680 DARS C - 12 A vs. T 0.1 (A) 0.142 (A) <1 (-) 0 (-) <0.05
rs2304370 chr2:136561735 LCT C - 12 A vs. G 0.117 (A) 0.158 (A) <1 (-) 0 (-) <0.05
rs76097170 chr2:136593498 LCT C - 12 T vs. C 0.117 (T) 0.3 (T) <1 (-) 0 (-) <0.05
rs56064699 chr2:136595706 LCT [+956bp] C - 12 A vs. G 0.108 (A) 0.142 (A) <1 (-) 0 (-) <0.05
rs11895319 chr2:136593678 LCT C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs60253740 chr2:136571852 LCT C - 12 T vs. G 0.117 (T) 0.1 (T) <1 (-) 0 (-) <0.05
rs61240933 chr2:136572285 LCT C - 12 C vs. G - - >1 (-) 0 (-) <0.05
rs3769012 chr2:136556480 LCT C - 12 A vs. G 0.117 (A) 0.092 (A) <1 (-) 0 (-) <0.05
rs3769013 chr2:136556182 LCT C - 12 T vs. C 0.117 (T) 0.108 (T) <1 (-) 0 (-) <0.05
rs3769008 chr2:136586183 LCT C - 12 T vs. C 0.117 (T) 0.108 (T) <1 (-) 0 (-) <0.05
rs2322813 chr2:136582809 LCT C - 12 A vs. G 0.117 (G) 0.1 (G) >1 (-) 0 (-) <0.05
rs58116536 chr2:136585323 LCT C - 12 T vs. C 0.117 (T) 0.108 (T) <1 (-) 0 (-) <0.05
rs58509842 chr2:136586027 LCT C - 12 A vs. G 0.117 (A) 0.1 (A) <1 (-) 0 (-) <0.05
rs59243420 chr2:136584538 LCT C - 12 A vs. T 0.117 (T) 0.067 (T) >1 (-) 0 (-) <0.05
rs730005 chr2:136582694 LCT C - 12 T vs. C 0.117 (C) 0.092 (C) >1 (-) 0 (-) <0.05
rs12475398 chr2:136560464 LCT C - 12 T vs. C - - <1 (-) 0 (-) <0.05
rs73957037 chr2:136588031 LCT C - 12 A vs. C 0.117 (A) 0.3 (A) <1 (-) 0 (-) <0.05
rs11886852 chr2:136589379 LCT C - 12 A vs. G 0.117 (A) 0.3 (A) <1 (-) 0 (-) <0.05
rs9636213 chr2:136589278 LCT C - 12 A vs. G 0.117 (G) 0.3 (G) >1 (-) 0 (-) <0.05
rs75205078 chr2:136554120 LCT C - 9 T vs. C - - >1 (-) 0 (-) <0.05
rs61451678 chr2:136589741 LCT C - 12 A vs. G - - <1 (-) 0 (-) <0.05
rs55809728 chr2:136600176 MCM6 C - 13 A vs. G 0.058 (A) 0.2 (A) <1 (-) 0 (-) <0.05
rs1963885 chr2:136553022 LCT C - 12 C vs. G - - >1 (-) 0 (-) <0.05
rs1807356 chr2:136555484 LCT C - 13 T vs. C 0.067 (C) 0.242 (C) >1 (-) 0 (-) <0.05
rs2015532 chr2:136555525 LCT C - 12 T vs. G 0.117 (G) 0.133 (G) >1 (-) 0 (-) <0.05
rs7565053 chr2:136552629 LCT C - 13 A vs. T 0.05 (T) 0.158 (T) >1 (-) 0 (-) <0.05
rs76889783 chr2:136580744 LCT C - 12 T vs. C 0.025 (T) - <1 (-) 0 (-) <0.05
rs3213890 chr2:136552188 LCT C - 12 A vs. G 0.117 (A) 0.142 (A) <1 (-) 0 (-) <0.05
rs2164212 chr2:136551537 LCT C - 12 A vs. T - - >1 (-) 0 (-) <0.05
rs3816155 chr2:136552526 LCT C - 12 A vs. C 0.125 (A) 0.175 (A) <1 (-) 0 (-) <0.05
rs4954430 chr2:136553925 LCT C - 13 T vs. C 0.05 (T) 0.125 (T) <1 (-) 0 (-) <0.05
rs6430588 chr2:136554797 LCT C - 12 T vs. C - - <1 (-) 0 (-) <0.05
rs56982689 chr2:136553438 LCT C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs746857 chr2:136554890 LCT C - 12 A vs. G 0.117 (G) 0.2 (G) >1 (-) 0 (-) <0.05
rs77681363 chr2:136560126 LCT C - 12 T vs. C 0.025 (T) - <1 (-) 0 (-) <0.05
rs148959072 chr2:136657998 DARS [-6249bp] C - 12 A vs. C - - >1 (-) 0 (-) <0.05
rs140159081 chr2:136553713 LCT C - 3 T vs. G - - >1 (-) 0 (-) <0.05
rs147766238 chr2:136554085 LCT C - 3 A vs. T - - >1 (-) 0 (-) <0.05
rs3754689 chr2:136590746 LCT C - 11 T vs. C 0.117 (T) 0.3 (T) <1 (-) 0 (-) <0.05
rs16855656 chr2:136642433 MCM6 [+8437bp] C - 13 A vs. G 0.067 (G) 0.417 (G) >1 (-) 0 (-) <0.05
rs872151 chr2:136556805 LCT C - 13 T vs. C 0.067 (T) 0.233 (T) <1 (-) 0 (-) <0.05
rs3213871 chr2:136615222 MCM6 C - 13 T vs. C 0.067 (T) 0.25 (T) <1 (-) 0 (-) <0.05
rs56263017 chr2:136624919 MCM6 C - 13 T vs. C 0.067 (C) 0.233 (C) >1 (-) 0 (-) <0.05
rs60274701 chr2:136565328 LCT C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs143544739 chr2:136548123 LCT C - 10 A vs. G - - <1 (-) 46 (-) <0.05

Association studies for this region [+]