MECR, chr1:29519385-29557454 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs571080 chr1:29508327 SRSF4 C - 13 C vs. G 0.067 (G) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs140931387 chr1:29513929 SRSF4 [+5430bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs1008449 chr1:29491088 SRSF4 C - 13 T vs. C 0.325 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs1565714 chr1:29574363 PTPRU C - 13 A vs. G 0.483 (A) - >1 (-) 0 (-) >0.05
rs2452787 chr1:29497250 SRSF4 C - 13 T vs. C 0.333 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs2640467 chr1:29556158 MECR C - 13 T vs. C 0.325 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs112731442 chr1:29514409 MECR [-4976bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs10915247 chr1:29598984 PTPRU C - 13 C vs. G 0.392 (G) 0.133 (C) >1 (-) 44 (-) >0.05
rs1908088 chr1:29572966 PTPRU C - 13 C vs. G 0.475 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs2503017 chr1:29533080 MECR C - 13 A vs. G 0.325 (G) 0.05 (G) >1 (-) 0 (-) >0.05
rs12030926 chr1:29601718 PTPRU C - 13 A vs. G 0.383 (G) 0.133 (A) >1 (-) 44 (-) >0.05
rs61783707 chr1:29543700 MECR C - 13 A vs. T 0.458 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs12032476 chr1:29529943 MECR C - 12 T vs. C 0.467 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs3094740 chr1:29507647 SRSF4 C - 13 C vs. G 0.325 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs2819602 chr1:29573723 PTPRU C - 13 T vs. C 0.483 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs6661685 chr1:29518421 MECR [-964bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs71514297 chr1:29485475 SRSF4 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7522989 chr1:29552958 MECR C - 13 A vs. C 0.467 (A) - >1 (-) 0 (-) >0.05
rs78584114 chr1:29517716 MECR [-1669bp] C - 12 C vs. G 0.008 (C) - <1 (-) 0 (-) >0.05
rs10915233 chr1:29475975 SRSF4 C - 13 A vs. G 0.467 (A) 0.067 (A) >1 (-) 0 (-) >0.05
rs6426352 chr1:29470843 SRSF4 [-3412bp] C - 13 C vs. G 0.458 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs34814292 chr1:29471752 SRSF4 [-2503bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs4654391 chr1:29493866 SRSF4 C - 13 T vs. C 0.475 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs4654393 chr1:29534437 MECR C - 13 A vs. G 0.467 (A) 0.05 (A) >1 (-) 0 (-) >0.05
chr1:29588946 chr1:29588946 PTPRU C - 11 A vs. T - - <1 (-) 64 (-) >0.05
rs12738007 chr1:29521705 MECR C - 13 T vs. C 0.458 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs75011501 chr1:29563059 PTPRU C - 13 T vs. C 0.167 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs72649296 chr1:29593410 PTPRU C - 13 A vs. G 0.133 (A) 0.183 (A) <1 (-) 39 (-) >0.05
rs34921636 chr1:29558281 MECR [+827bp] C - 13 A vs. G 0.458 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs34380016 chr1:29558230 MECR [+776bp] C - 13 A vs. G 0.467 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs2319207 chr1:29535131 MECR C - 13 T vs. C 0.067 (C) 0.358 (C) <1 (-) 22 (-) >0.05
rs4654400 chr1:29584271 PTPRU C - 13 T vs. C 0.375 (T) 0.133 (C) <1 (-) 40 (-) >0.05
rs114791406 chr1:29548563 MECR C - 9 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs3222 chr1:29518721 MECR [-664bp] C - 13 T vs. G 0.067 (G) 0.358 (G) <1 (-) 15 (-) >0.05
rs6676287 chr1:29598291 PTPRU C - 13 A vs. G 0.408 (G) 0.133 (A) >1 (-) 37 (-) >0.05
rs79584455 chr1:29536158 MECR C - 13 T vs. G 0.067 (T) 0.358 (T) >1 (-) 17 (-) >0.05
rs61783694 chr1:29510934 SRSF4 [+2435bp] C - 13 T vs. C 0.45 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs10915237 chr1:29517273 MECR [-2112bp] C - 13 T vs. C 0.067 (T) 0.383 (T) >1 (-) 21 (-) >0.05
rs12030745 chr1:29526183 MECR C - 13 A vs. T - - >1 (-) 19 (-) >0.05
rs10915234 chr1:29488047 SRSF4 C - 13 A vs. G 0.067 (A) 0.358 (A) >1 (-) 17 (-) >0.05
rs17340871 chr1:29577235 PTPRU C - 13 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs74434917 chr1:29538146 MECR C - 13 A vs. G 0.067 (A) 0.358 (A) >1 (-) 21 (-) >0.05
rs12033768 chr1:29541761 MECR C - 13 T vs. C 0.05 (T) 0.358 (T) >1 (-) 22 (-) >0.05
rs3766948 chr1:29525191 MECR C - 13 T vs. C - - >1 (-) 19 (-) >0.05
rs2291611 chr1:29522384 MECR C - 13 A vs. G 0.067 (A) 0.358 (A) >1 (-) 19 (-) >0.05
rs6687475 chr1:29596084 PTPRU C - 13 C vs. G 0.3 (G) 0.192 (G) >1 (-) 38 (-) >0.05
rs113809418 chr1:29541043 MECR C - 13 T vs. G - - <1 (-) 22 (-) >0.05
rs6690526 chr1:29534313 MECR C - 13 T vs. C 0.067 (T) 0.35 (T) >1 (-) 20 (-) >0.05
rs3738062 chr1:29532943 MECR C - 13 A vs. T 0.067 (A) 0.35 (A) >1 (-) 20 (-) >0.05
rs12046213 chr1:29513323 SRSF4 [+4824bp] C - 13 A vs. G 0.067 (A) 0.358 (A) >1 (-) 16 (-) >0.05
rs16838019 chr1:29540532 MECR C - 13 T vs. C 0.067 (T) 0.35 (T) >1 (-) 21 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.