PTPRU, chr1:29563028-29653325 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12083545 chr1:29540511 MECR C - 13 T vs. C 0.067 (C) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12083545 chr1:29540511 MECR C - 13 T vs. C 0.067 (C) - >1 (-) 0 (-) <0.05
rs1565715 chr1:29539823 MECR C - 13 T vs. C 0.067 (T) - <1 (-) 0 (-) <0.05
rs903045 chr1:29528412 MECR C - 13 C vs. G 0.067 (C) - <1 (-) 0 (-) <0.05
rs2452771 chr1:29527332 MECR C - 13 A vs. G 0.067 (A) - <1 (-) 0 (-) <0.05
rs2503016 chr1:29527145 MECR C - 13 T vs. C 0.067 (T) - <1 (-) 0 (-) <0.05
rs2503011 chr1:29558468 MECR [+1014bp] C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) <0.05
rs2819607 chr1:29538856 MECR C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs579187 chr1:29513811 SRSF4 [+5312bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs12097553 chr1:29571222 PTPRU C - 13 T vs. C 0.067 (C) - >1 (-) 0 (-) <0.05
rs1565716 chr1:29549216 MECR C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) <0.05
rs12057666 chr1:29571758 PTPRU C - 13 T vs. G 0.067 (G) - >1 (-) 0 (-) <0.05
rs12090293 chr1:29571478 PTPRU C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) <0.05
rs12093024 chr1:29572922 PTPRU C - 13 A vs. G 0.067 (A) - <1 (-) 0 (-) <0.05
rs12097349 chr1:29576015 PTPRU C - 13 A vs. G 0.042 (A) - <1 (-) 0 (-) <0.05
rs7349137 chr1:29569212 PTPRU C - 13 T vs. C 0.217 (C) 0.458 (T) >1 (-) 0 (-) <0.05
rs10915243 chr1:29567981 PTPRU C - 13 T vs. C 0.217 (C) 0.45 (T) >1 (-) 0 (-) <0.05
rs4654397 chr1:29568850 PTPRU C - 13 T vs. C 0.217 (C) 0.458 (T) >1 (-) 0 (-) <0.05
rs78461693 chr1:29574263 PTPRU C - 13 A vs. G 0.008 (G) - >1 (-) 0 (-) <0.05
rs144373784 chr1:29658548 PTPRU [+5223bp] C - 8 A vs. C - - <1 (-) 0 (-) <0.05
rs139590890 chr1:29528622 MECR C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs12130937 chr1:29538421 MECR C - 12 A vs. C - - >1 (-) 0 (-) <0.05
rs139360773 chr1:29548304 MECR C - 7 T vs. C - - <1 (-) 40 (-) <0.05
rs7550930 chr1:29594563 PTPRU C - 13 T vs. C 0.333 (T) 0.183 (T) <1 (-) 40 (-) <0.05
rs141053889 chr1:29542442 MECR C - 13 T vs. G - - >1 (-) 0 (-) <0.05
rs72649289 chr1:29586188 PTPRU C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) <0.05
rs72649290 chr1:29586213 PTPRU C - 13 T vs. G 0.033 (T) - <1 (-) 0 (-) <0.05
rs2076619 chr1:29610763 PTPRU C - 13 T vs. C - 0.192 (T) >1 (-) 8 (-) <0.05
rs72649294 chr1:29591457 PTPRU C - 13 A vs. C - - >1 (-) 0 (-) <0.05
rs72649300 chr1:29597016 PTPRU C - 13 T vs. C 0.025 (T) - <1 (-) 0 (-) <0.05
rs4654395 chr1:29567412 PTPRU C - 13 T vs. C 0.45 (C) 0.425 (T) >1 (-) 0 (-) <0.05
rs112349347 chr1:29600741 PTPRU C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) <0.05
rs17262440 chr1:29604772 PTPRU C - 13 T vs. C 0.033 (C) - >1 (-) 0 (-) <0.05
rs72651203 chr1:29605646 PTPRU C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) <0.05
rs3737606 chr1:29630956 PTPRU C - 13 A vs. G 0.267 (G) 0.15 (G) >1 (-) 33 (-) <0.05
rs28489866 chr1:29634887 PTPRU C - 11 C vs. G - 0.2 (G) <1 (-) 26 (-) >0.05
rs79528371 chr1:29608879 PTPRU C - 13 T vs. C 0.033 (C) - >1 (-) 0 (-) >0.05
rs10489445 chr1:29655746 PTPRU [+2421bp] C - 13 A vs. G 0.175 (A) 0.425 (G) >1 (-) 0 (-) >0.05
rs139803719 chr1:29519440 MECR C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs16838010 chr1:29536276 MECR C - 13 T vs. C 0.017 (C) 0.358 (C) <1 (-) 9 (-) >0.05
rs2235939 chr1:29637136 PTPRU C - 13 T vs. C 0.358 (C) 0.317 (T) <1 (-) 27 (-) >0.05
rs12402313 chr1:29655656 PTPRU [+2331bp] C - 13 A vs. G 0.175 (A) 0.425 (G) >1 (-) 0 (-) >0.05
rs7556162 chr1:29636146 PTPRU C - 13 T vs. C 0.358 (C) 0.342 (T) <1 (-) 28 (-) >0.05
rs77405331 chr1:29643577 PTPRU C - 11 C vs. G - 0.1 (C) >1 (-) 17 (-) >0.05
rs76049312 chr1:29643558 PTPRU C - 11 C vs. G - 0.108 (G) <1 (-) 16 (-) >0.05
rs4654396 chr1:29568592 PTPRU C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs141763839 chr1:29527585 MECR C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs76321435 chr1:29644698 PTPRU C - 12 C vs. G - 0.1 (C) >1 (-) 0 (-) >0.05
rs140281873 chr1:29645882 PTPRU C - 12 A vs. G - - >1 (-) 8 (-) >0.05
rs16837970 chr1:29517820 MECR [-1565bp] C - 13 T vs. C - 0.358 (T) >1 (-) 7 (-) >0.05
rs10915246 chr1:29590793 PTPRU C - 13 A vs. C 0.375 (A) 0.1 (C) <1 (-) 42 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.