NDC1, chr1:54231133-54304533 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1181191 chr1:54224270 NDC1 [-6863bp] All: C 103,235 14 C vs. A - - 0.85 (0.78-0.91) 0 (0-17) 2.27e-05
Meta_image?name=rs1181191

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6680026 chr1:54345792 YIPF1 C - 13 T vs. C 0.45 (C) 0.1 (C) <1 (-) 22 (-) >0.05
rs3766468 chr1:54333594 YIPF1 C - 13 T vs. C 0.367 (T) 0.35 (C) <1 (-) 0 (-) >0.05
rs11206231 chr1:54339727 YIPF1 C - 13 A vs. T 0.367 (A) 0.358 (T) <1 (-) 2 (-) >0.05
rs1883452 chr1:54331715 YIPF1 C - 13 C vs. G 0.367 (G) 0.35 (C) >1 (-) 0 (-) >0.05
rs3766469 chr1:54333474 YIPF1 C - 13 A vs. T 0.367 (T) 0.35 (A) >1 (-) 0 (-) >0.05
rs7516269 chr1:54347152 YIPF1 C - 13 T vs. G - - <1 (-) 23 (-) >0.05
rs6678296 chr1:54341369 YIPF1 C - 13 A vs. C 0.367 (C) 0.35 (A) >1 (-) 4 (-) >0.05
rs7526676 chr1:54334021 YIPF1 C - 13 T vs. C 0.367 (C) 0.35 (T) >1 (-) 0 (-) >0.05
rs702491 chr1:54194992 GLIS1 C - 13 T vs. C 0.167 (T) 0.133 (T) >1 (-) 14 (-) >0.05
rs10888813 chr1:54340672 YIPF1 C - 13 A vs. G 0.367 (A) 0.35 (G) <1 (-) 2 (-) >0.05
rs6661911 chr1:54331285 YIPF1 C - 13 A vs. G 0.45 (A) 0.1 (A) >1 (-) 20 (-) >0.05
rs6689665 chr1:54341762 YIPF1 C - 13 A vs. G 0.367 (A) 0.35 (G) <1 (-) 0 (-) >0.05
rs10888812 chr1:54340300 YIPF1 C - 13 A vs. G - - <1 (-) 2 (-) >0.05
rs11206232 chr1:54342837 YIPF1 C - 13 T vs. C 0.367 (T) 0.35 (C) <1 (-) 1 (-) >0.05
rs6588494 chr1:54330717 YIPF1 C - 13 A vs. T 0.367 (A) 0.35 (T) <1 (-) 0 (-) >0.05
rs11206233 chr1:54342977 YIPF1 C - 13 A vs. G 0.367 (G) 0.35 (A) >1 (-) 2 (-) >0.05
rs7541049 chr1:54343294 YIPF1 C - 13 T vs. C 0.367 (C) 0.35 (T) >1 (-) 2 (-) >0.05
rs7548793 chr1:54343342 YIPF1 C - 13 A vs. G 0.367 (A) 0.35 (G) <1 (-) 2 (-) >0.05
rs6678606 chr1:54341646 YIPF1 C - 13 A vs. C 0.367 (C) 0.35 (A) >1 (-) 1 (-) >0.05
rs10788964 chr1:54341947 YIPF1 C - 13 A vs. G 0.367 (A) 0.35 (G) <1 (-) 1 (-) >0.05
rs7526726 chr1:54353823 YIPF1 C - 13 T vs. C 0.483 (C) - <1 (-) 29 (-) >0.05
rs7526784 chr1:54334315 YIPF1 C - 13 A vs. T 0.375 (T) 0.35 (A) >1 (-) 0 (-) >0.05
rs72660679 chr1:54183531 GLIS1 C - 13 C vs. G 0.175 (G) - <1 (-) 3 (-) >0.05
rs10788968 chr1:54352646 YIPF1 C - 13 A vs. G 0.458 (A) 0.092 (A) >1 (-) 25 (-) >0.05
rs7515771 chr1:54350292 YIPF1 C - 13 A vs. T 0.45 (A) 0.092 (A) >1 (-) 25 (-) >0.05
rs10788967 chr1:54352019 YIPF1 C - 13 T vs. G 0.45 (T) 0.1 (T) >1 (-) 25 (-) >0.05
rs7517900 chr1:54350164 YIPF1 C - 13 T vs. C 0.45 (T) 0.092 (T) >1 (-) 25 (-) >0.05
rs72660683 chr1:54191811 GLIS1 C - 13 T vs. C 0.175 (C) - <1 (-) 4 (-) >0.05
rs6681549 chr1:54328814 YIPF1 C - 13 A vs. G 0.367 (A) 0.358 (G) <1 (-) 0 (-) >0.05
rs115917478 chr1:54217999 NDC1 [-13134bp] C - 13 T vs. C 0.017 (T) - >1 (-) 37 (-) >0.05
rs7541170 chr1:54343462 YIPF1 C - 13 T vs. C 0.358 (C) 0.35 (T) >1 (-) 2 (-) >0.05
rs17388507 chr1:54187575 GLIS1 C - 13 C vs. G 0.175 (G) - <1 (-) 3 (-) >0.05
rs10788965 chr1:54343718 YIPF1 C - 13 T vs. G 0.367 (T) 0.35 (G) <1 (-) 2 (-) >0.05
rs11206235 chr1:54345822 YIPF1 C - 13 T vs. C 0.367 (C) 0.35 (T) >1 (-) 1 (-) >0.05
rs11206234 chr1:54345590 YIPF1 C - 13 T vs. C 0.367 (T) 0.35 (C) <1 (-) 2 (-) >0.05
rs7554636 chr1:54193023 GLIS1 C - 13 T vs. C 0.2 (C) 0.192 (C) <1 (-) 13 (-) >0.05
rs10465829 chr1:54346897 YIPF1 C - 13 A vs. G - - <1 (-) 1 (-) >0.05
rs2316992 chr1:54344690 YIPF1 C - 13 T vs. C 0.367 (T) 0.342 (C) <1 (-) 2 (-) >0.05
rs6703639 chr1:54345975 YIPF1 C - 13 A vs. G 0.45 (G) 0.1 (G) <1 (-) 23 (-) >0.05
rs116561561 chr1:54336505 YIPF1 C - 10 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs2316993 chr1:54344619 YIPF1 C - 13 T vs. C 0.367 (T) 0.35 (C) <1 (-) 3 (-) >0.05
rs7556600 chr1:54310719 NDC1 [+6186bp] C - 13 A vs. G 0.05 (A) 0.067 (A) >1 (-) 33 (-) >0.05
rs7516530 chr1:54347427 YIPF1 C - 13 T vs. G - - <1 (-) 2 (-) >0.05
rs1127931 chr1:54317485 YIPF1 C - 13 A vs. G 0.058 (A) 0.075 (A) >1 (-) 30 (-) >0.05
rs55873284 chr1:54188674 GLIS1 C - 13 T vs. C - - <1 (-) 15 (-) >0.05
rs6658137 chr1:54188994 GLIS1 C - 13 T vs. C 0.192 (C) 0.225 (C) <1 (-) 15 (-) >0.05
rs3737835 chr1:54348716 YIPF1 C - 13 T vs. C 0.058 (C) 0.075 (C) <1 (-) 28 (-) >0.05
rs55718124 chr1:54188577 GLIS1 C - 13 A vs. G - - >1 (-) 15 (-) >0.05
rs113642775 chr1:54209853 GLIS1 [+9976bp] C - 12 T vs. C 0.025 (C) - <1 (-) 21 (-) >0.05
rs11589713 chr1:54319776 YIPF1 C - 13 T vs. C 0.058 (C) 0.075 (C) <1 (-) 30 (-) >0.05

Association studies for this region [+]