PAQR6, chr1:156213206-156217881 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3768276 chr1:156198366 PMF1-BGLAP C - 13 A vs. G 0.458 (G) 0.233 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12066033 chr1:156232198 SMG5 C - 13 T vs. C 0.167 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs2287024 chr1:156230206 SMG5 C - 13 A vs. C 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs2287025 chr1:156230141 SMG5 C - 13 A vs. T 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs2093487 chr1:156231725 SMG5 C - 13 A vs. C 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs7523099 chr1:156234638 SMG5 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1543294 chr1:156209857 PMF1-BGLAP C - 13 T vs. C 0.167 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs2365152 chr1:156231484 SMG5 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6669805 chr1:156228108 SMG5 C - 13 T vs. C 0.167 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs6693732 chr1:156228544 SMG5 C - 13 A vs. G 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs61814770 chr1:156232737 SMG5 C - 13 A vs. T 0.167 (T) 0.3 (T) >1 (-) 0 (-) >0.05
rs6699349 chr1:156226950 SMG5 C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs7533548 chr1:156230605 SMG5 C - 13 C vs. G 0.158 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs759328 chr1:156231266 SMG5 C - 13 C vs. G 0.167 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs7552992 chr1:156224656 SMG5 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2241110 chr1:156172487 SLC25A44 C - 13 T vs. C 0.058 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs35831149 chr1:156230272 SMG5 C - 10 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs114416960 chr1:156247665 SMG5 C - 6 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs142007952 chr1:156228647 SMG5 C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs141883748 chr1:156246170 SMG5 C - 12 A vs. G - - >1 (-) 10 (-) >0.05
rs36038623 chr1:156217253 PAQR6 C - 12 C vs. G 0.1 (C) - >1 (-) 0 (-) >0.05
rs71630621 chr1:156250166 SMG5 C - 5 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs115617321 chr1:156214733 PAQR6 C - 10 A vs. G 0.058 (A) - >1 (-) 0 (-) >0.05
rs142661706 chr1:156253475 TMEM79 C - 13 T vs. C - - >1 (-) 18 (-) >0.05
rs62001925 chr1:156214601 PAQR6 C - 10 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs41265035 chr1:156247967 SMG5 C - 13 C vs. G 0.025 (C) - >1 (-) 18 (-) >0.05
rs12715 chr1:156209766 PMF1-BGLAP C - 4 A vs. G - - >1 (-) 55 (-) >0.05
rs4661036 chr1:156233479 SMG5 C - 13 T vs. C 0.167 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs2842879 chr1:156163695 SLC25A44 [-185bp] C - 13 T vs. G 0.058 (T) 0.1 (T) >1 (-) 0 (-) >0.05
rs12401854 chr1:156217401 PAQR6 C - 13 T vs. C 0.108 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs75854315 chr1:156223056 SMG5 C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs7513351 chr1:156213921 PAQR6 C - 13 T vs. C 0.117 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs2540169 chr1:156218114 PAQR6 [+233bp] C - 13 A vs. G 0.192 (A) 0.267 (A) <1 (-) 24 (-) >0.05
rs7530415 chr1:156184659 PMF1-BGLAP C - 13 T vs. G - - >1 (-) 3 (-) >0.05
rs148390696 chr1:156262607 TMEM79 C - 11 C vs. G - - >1 (-) 7 (-) >0.05
rs60844051 chr1:156186647 PMF1-BGLAP C - 13 T vs. G - - <1 (-) 3 (-) >0.05
rs142390189 chr1:156250466 SMG5 C - 7 A vs. C - - >1 (-) 0 (-) >0.05
rs146935584 chr1:156244060 SMG5 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs2253358 chr1:156228060 SMG5 C - 13 T vs. C 0.183 (C) 0.267 (C) >1 (-) 31 (-) >0.05
rs1800247 chr1:156211825 PMF1-BGLAP C - 13 T vs. C 0.183 (C) 0.217 (C) >1 (-) 28 (-) >0.05
rs2540168 chr1:156223823 SMG5 C - 13 T vs. C 0.208 (C) 0.267 (C) >1 (-) 30 (-) >0.05
rs62001899 chr1:156206158 PMF1-BGLAP C - 13 T vs. C - - <1 (-) 28 (-) >0.05
rs139569651 chr1:156240950 SMG5 C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs11585822 chr1:156207597 PMF1-BGLAP C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs61814772 chr1:156258046 TMEM79 C - 12 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs149480232 chr1:156177169 SLC25A44 C - 13 A vs. C - - >1 (-) 16 (-) >0.05
rs1570805 chr1:156264648 C1orf85 C - 12 T vs. C 0.108 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs111316901 chr1:156199854 PMF1-BGLAP C - 12 T vs. C 0.042 (T) - >1 (-) 35 (-) >0.05
rs74634803 chr1:156207690 PMF1-BGLAP C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs139741968 chr1:156195155 PMF1-BGLAP C - 13 T vs. G - - >1 (-) 14 (-) >0.05
rs116233133 chr1:156198202 PMF1-BGLAP C - 13 A vs. T 0.008 (T) - >1 (-) 12 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.