PCGF3, chr4:699537-764428 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3775146 chr4:785228 CPLX1 C - 13 C vs. G 0.242 (C) 0.342 (C) >1 (-) 18 (-) <5.00e-08

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28624826 chr4:757758 PCGF3 All: C 105,041 14 T vs. C 0.1 (T) 0.1 (T) 1.14 (1.07-1.22) 25 (0-60) 5.73e-05
rs73058499 chr4:768978 PCGF3 [+4550bp] All: C 108,990 15 C vs. T 0.092 (C) 0.075 (C) 1.14 (1.07-1.21) 19 (0-56) 6.13e-05
rs17165051 chr4:813428 CPLX1 All: C 108,990 15 T vs. G 0.425 (T) 0.267 (T) 0.94 (0.91-0.97) 0 (0-35) 6.23e-05
rs6828898 chr4:765111 PCGF3 [+683bp] All: C 105,041 14 G vs. A - - 0.86 (0.80-0.93) 25 (0-60) 8.58e-05
rs2279174 chr4:737596 PCGF3 C - 13 T vs. C 0.083 (T) 0.058 (T) >1 (-) 18 (-) <1.00e-04
rs62294060 chr4:744190 PCGF3 C - 13 A vs. G 0.083 (A) 0.058 (A) >1 (-) 17 (-) <1.00e-04
rs74375390 chr4:776007 CPLX1 [-2738bp] All: C 105,041 14 C vs. T 0.092 (C) 0.067 (C) 1.16 (1.08-1.25) 31 (0-63) 9.18e-05
rs4690190 chr4:742465 PCGF3 C - 13 A vs. G 0.083 (G) 0.033 (G) <1 (-) 17 (-) <1.00e-04
rs73221109 chr4:712650 PCGF3 All: C 105,041 14 A vs. G 0.083 (A) 0.067 (A) 1.13 (1.06-1.21) 19 (0-56) 9.74e-05
rs60018246 chr4:799988 CPLX1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs34959417 chr4:750492 PCGF3 C - 13 T vs. C 0.267 (T) 0.208 (T) >1 (-) 0 (-) <0.05
rs7672212 chr4:729066 PCGF3 All: C 105,041 14 T vs. G - - 0.89 (0.85-0.95) 25 (0-60) 1.22e-04
rs4690296 chr4:732261 PCGF3 All: C 108,990 15 G vs. A 0.083 (G) 0.058 (G) 1.12 (1.06-1.18) 20 (0-56) 1.23e-04
rs4690305 chr4:748451 PCGF3 C - 12 T vs. C 0.475 (C) 0.433 (T) >1 (-) 0 (-) <0.05
rs4690293 chr4:706101 PCGF3 C - 13 A vs. G 0.383 (G) 0.225 (G) >1 (-) 14 (-) <0.05
rs79713586 chr4:729655 PCGF3 C - 12 A vs. T 0.075 (T) 0.117 (T) <1 (-) 30 (-) <0.05
rs4690187 chr4:703813 PCGF3 C - 13 T vs. C 0.383 (T) 0.233 (T) <1 (-) 13 (-) <0.05
rs12374324 chr4:714215 PCGF3 C - 13 A vs. G 0.333 (A) 0.2 (A) <1 (-) 36 (-) <0.05
rs12502944 chr4:736054 PCGF3 C - 13 A vs. G 0.317 (A) 0.192 (A) <1 (-) 37 (-) <0.05
rs4690292 chr4:703712 PCGF3 C - 13 A vs. G 0.383 (G) 0.225 (G) >1 (-) 13 (-) <0.05
rs11734460 chr4:705074 PCGF3 C - 13 T vs. C 0.383 (T) 0.217 (T) <1 (-) 13 (-) <0.05
rs138688201 chr4:705538 PCGF3 C - 13 A vs. G - - >1 (-) 13 (-) <0.05
rs4690186 chr4:703607 PCGF3 C - 13 A vs. G 0.383 (A) 0.225 (A) <1 (-) 13 (-) <0.05
rs12504026 chr4:712863 PCGF3 C - 13 C vs. G - - <1 (-) 13 (-) <0.05
rs12374317 chr4:713920 PCGF3 C - 13 T vs. G 0.383 (T) 0.225 (T) <1 (-) 13 (-) <0.05
rs11248036 chr4:714367 PCGF3 C - 13 A vs. G 0.383 (G) 0.225 (G) >1 (-) 13 (-) <0.05
rs17164964 chr4:745053 PCGF3 C - 13 T vs. C 0.325 (C) 0.183 (C) >1 (-) 37 (-) <0.05
rs6845891 chr4:744233 PCGF3 C - 13 T vs. C 0.325 (C) 0.2 (C) >1 (-) 37 (-) <0.05
rs73221103 chr4:706740 PCGF3 C - 13 T vs. C 0.383 (C) 0.225 (C) >1 (-) 12 (-) <0.05
rs4690192 chr4:743670 PCGF3 C - 13 A vs. G 0.325 (G) 0.2 (G) >1 (-) 37 (-) <0.05
rs73221200 chr4:743826 PCGF3 C - 13 A vs. G 0.325 (A) 0.225 (A) <1 (-) 37 (-) <0.05
rs11728488 chr4:710500 PCGF3 C - 13 T vs. C - - <1 (-) 36 (-) <0.05
rs73221104 chr4:707135 PCGF3 C - 13 T vs. C 0.375 (C) 0.2 (C) >1 (-) 11 (-) <0.05
rs55990625 chr4:736485 PCGF3 C - 13 T vs. C 0.325 (T) 0.2 (T) <1 (-) 38 (-) <0.05
rs2242233 chr4:755025 PCGF3 C - 13 A vs. G 0.367 (A) 0.2 (A) <1 (-) 0 (-) <0.05
rs11734005 chr4:783194 CPLX1 C - 13 T vs. G 0.375 (T) 0.167 (T) <1 (-) 0 (-) <0.05
rs17165034 chr4:798962 CPLX1 C - 13 A vs. G 0.367 (A) 0.192 (A) <1 (-) 0 (-) <0.05
rs3775143 chr4:783333 CPLX1 C - 13 T vs. C 0.375 (C) 0.183 (C) >1 (-) 0 (-) <0.05
rs4690282 chr4:754484 PCGF3 C - 13 T vs. C 0.35 (T) 0.2 (T) <1 (-) 0 (-) <0.05
rs11940788 chr4:705608 PCGF3 C - 13 A vs. G - - <1 (-) 12 (-) <0.05
rs73219293 chr4:702169 PCGF3 C - 13 A vs. G 0.325 (A) 0.158 (A) <1 (-) 31 (-) <0.05
rs10004172 chr4:733221 PCGF3 C - 13 A vs. C - 0.2 (A) <1 (-) 37 (-) <0.05
rs4690194 chr4:760819 PCGF3 C - 13 T vs. C 0.367 (T) 0.2 (T) <1 (-) 0 (-) <0.05
rs12505220 chr4:735974 PCGF3 C - 13 T vs. C - - <1 (-) 38 (-) <0.05
rs73221124 chr4:726956 PCGF3 C - 13 A vs. G 0.392 (G) 0.225 (G) >1 (-) 13 (-) <0.05
rs4690310 chr4:758524 PCGF3 C - 13 A vs. G 0.367 (A) 0.2 (A) <1 (-) 0 (-) <0.05
rs899391 chr4:758000 PCGF3 C - 13 T vs. C 0.367 (T) 0.2 (T) <1 (-) 0 (-) <0.05
rs11248035 chr4:714019 PCGF3 C - 13 A vs. G 0.383 (A) 0.225 (A) <1 (-) 13 (-) <0.05
rs4690294 chr4:719660 PCGF3 C - 13 A vs. G 0.392 (G) 0.2 (G) >1 (-) 13 (-) <0.05
rs11248040 chr4:770508 PCGF3 [+6080bp] C - 13 T vs. C 0.367 (T) 0.2 (T) <1 (-) 0 (-) <0.05

Association studies for this region [+]