PCGF3, chr4:699537-764428 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3775146 chr4:785228 CPLX1 C - 13 C vs. G 0.242 (C) 0.342 (C) >1 (-) 18 (-) <5.00e-08

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7682244 chr4:771759 CPLX1 [-6986bp] C - 13 A vs. G 0.367 (A) 0.183 (A) <1 (-) 0 (-) <0.05
rs4690295 chr4:719715 PCGF3 C - 13 A vs. G 0.358 (G) 0.225 (G) >1 (-) 13 (-) <0.05
rs4234853 chr4:735150 PCGF3 C - 13 A vs. G 0.325 (A) 0.2 (A) <1 (-) 38 (-) <0.05
rs3733358 chr4:778599 CPLX1 [-146bp] C - 13 T vs. C 0.358 (T) 0.175 (T) <1 (-) 0 (-) <0.05
rs199793490 chr4:726848 PCGF3 C - 13 A vs. G - - <1 (-) 11 (-) <0.05
rs11724278 chr4:794564 CPLX1 C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs11735280 chr4:724061 PCGF3 C - 13 C vs. G 0.375 (C) 0.233 (C) <1 (-) 12 (-) <0.05
rs11729160 chr4:794639 CPLX1 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs4690315 chr4:791891 CPLX1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs13110907 chr4:730139 PCGF3 C - 12 T vs. C 0.083 (C) 0.058 (C) <1 (-) 19 (-) <0.05
rs7376288 chr4:741742 PCGF3 C - 12 T vs. C 0.225 (T) 0.258 (T) >1 (-) 40 (-) <0.05
rs57170954 chr4:790683 CPLX1 C - 13 C vs. G 0.367 (C) 0.2 (C) <1 (-) 0 (-) <0.05
rs10452329 chr4:716248 PCGF3 C - 12 T vs. C 0.242 (C) 0.267 (C) <1 (-) 45 (-) <0.05
rs34434107 chr4:727153 PCGF3 C - 12 T vs. C 0.233 (T) 0.267 (T) >1 (-) 44 (-) <0.05
rs13116048 chr4:721565 PCGF3 C - 12 A vs. G 0.267 (A) 0.425 (A) >1 (-) 32 (-) <0.05
rs77886012 chr4:757138 PCGF3 C - 12 T vs. C 0.05 (T) - >1 (-) 40 (-) <0.05
rs73221129 chr4:729603 PCGF3 C - 13 A vs. G 0.425 (G) 0.342 (G) >1 (-) 22 (-) <0.05
rs4690189 chr4:732899 PCGF3 All: C 108,990 15 G vs. T 0.325 (G) 0.2 (G) 0.94 (0.91-0.97) 47 (4-71) 4.83e-04
rs7377200 chr4:743519 PCGF3 C - 12 T vs. C - - >1 (-) 39 (-) <0.05
rs10034650 chr4:726322 PCGF3 C - 12 A vs. G 0.233 (A) 0.267 (A) >1 (-) 44 (-) <0.05
rs13131168 chr4:784096 CPLX1 C - 13 C vs. G 0.283 (C) 0.208 (C) >1 (-) 0 (-) <0.05
rs7672618 chr4:729290 PCGF3 C - 12 A vs. G 0.225 (A) 0.267 (A) >1 (-) 44 (-) <0.05
rs13136722 chr4:784313 CPLX1 C - 13 A vs. G 0.283 (A) 0.208 (A) >1 (-) 0 (-) <0.05
rs73207757 chr4:796308 CPLX1 All: C 108,990 15 C vs. T 0.367 (C) 0.208 (C) 0.94 (0.91-0.97) 0 (0-49) 5.17e-04
rs13151247 chr4:784142 CPLX1 C - 13 C vs. G 0.283 (G) 0.208 (G) <1 (-) 0 (-) <0.05
rs56730137 chr4:725440 PCGF3 C - 12 A vs. C - - >1 (-) 27 (-) <0.05
rs9328756 chr4:719287 PCGF3 C - 12 T vs. G 0.233 (T) 0.275 (T) >1 (-) 46 (-) <0.05
rs13105255 chr4:784322 CPLX1 C - 13 T vs. C 0.283 (T) 0.208 (T) >1 (-) 0 (-) <0.05
rs13105473 chr4:784425 CPLX1 C - 13 C vs. G 0.3 (G) 0.208 (G) <1 (-) 0 (-) <0.05
rs13105702 chr4:784503 CPLX1 C - 13 C vs. G 0.283 (G) 0.2 (G) <1 (-) 0 (-) <0.05
rs6811216 chr4:782940 CPLX1 C - 13 A vs. G 0.275 (G) 0.2 (G) <1 (-) 0 (-) <0.05
rs7376403 chr4:743125 PCGF3 C - 12 A vs. T - - >1 (-) 40 (-) <0.05
rs13122480 chr4:784546 CPLX1 C - 13 T vs. C 0.292 (C) 0.2 (C) <1 (-) 0 (-) <0.05
rs7683551 chr4:768441 PCGF3 [+4013bp] C - 13 T vs. C 0.275 (C) 0.183 (C) <1 (-) 0 (-) <0.05
rs59438465 chr4:752276 PCGF3 C - 13 T vs. C 0.367 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs28497436 chr4:756045 PCGF3 All: C 108,990 15 C vs. T 0.275 (C) 0.167 (C) 1.06 (1.02-1.10) 0 (0-52) 8.12e-04
rs7677842 chr4:730385 PCGF3 C - 12 T vs. C - - <1 (-) 47 (-) <0.05
rs6599381 chr4:814313 CPLX1 C - 13 T vs. G 0.375 (T) 0.208 (T) <1 (-) 5 (-) <0.05
rs6599382 chr4:814404 CPLX1 C - 13 A vs. G 0.375 (A) 0.208 (A) <1 (-) 5 (-) <0.05
rs114047292 chr4:723468 PCGF3 C - 12 T vs. C 0.008 (T) - >1 (-) 25 (-) <0.05
rs12504575 chr4:813438 CPLX1 C - 13 A vs. G 0.425 (A) 0.3 (A) <1 (-) 0 (-) <0.05
rs6599380 chr4:812414 CPLX1 C - 13 T vs. C 0.375 (T) 0.208 (T) <1 (-) 6 (-) <0.05
rs7686544 chr4:812417 CPLX1 C - 13 A vs. G 0.367 (A) 0.208 (A) <1 (-) 6 (-) <0.05
rs9328757 chr4:809593 CPLX1 C - 13 A vs. G 0.375 (A) 0.208 (A) <1 (-) 6 (-) <0.05
rs10004503 chr4:793929 CPLX1 C - 12 T vs. C 0.1 (T) 0.108 (T) >1 (-) 42 (-) <0.05
rs73221121 chr4:722598 PCGF3 C - 13 T vs. C 0.333 (T) 0.192 (T) <1 (-) 29 (-) <0.05
rs114503621 chr4:730272 PCGF3 C - 13 T vs. C 0.3 (C) - >1 (-) 12 (-) <0.05
rs76984010 chr4:794832 CPLX1 C - 12 A vs. G - - >1 (-) 41 (-) <0.05
rs77052907 chr4:733630 PCGF3 C - 12 A vs. G - 0.033 (A) >1 (-) 22 (-) <0.05
rs149813422 chr4:730283 PCGF3 C - 13 T vs. C - - <1 (-) 9 (-) <0.05

Association studies for this region [+]