PCGF3, chr4:699537-764428 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3775146 chr4:785228 CPLX1 C - 13 C vs. G 0.242 (C) 0.342 (C) >1 (-) 18 (-) <5.00e-08

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11723514 chr4:788722 CPLX1 C - 13 A vs. G 0.308 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs78838194 chr4:723665 PCGF3 C - 13 T vs. C 0.075 (T) 0.133 (T) >1 (-) 24 (-) <0.05
rs35333201 chr4:757944 PCGF3 All: C 108,990 15 C vs. T 0.283 (C) 0.208 (C) 1.05 (1.02-1.09) 0 (0-46) 0.003
rs13131185 chr4:784116 CPLX1 All: C 108,990 15 A vs. G 0.275 (A) 0.208 (A) 1.05 (1.02-1.09) 0 (0-51) 0.003
rs13147679 chr4:776489 CPLX1 [-2256bp] All: C 108,990 15 G vs. A 0.275 (G) 0.225 (G) 1.05 (1.02-1.09) 0 (0-51) 0.003
rs4690281 chr4:753944 PCGF3 C - 12 A vs. G 0.383 (A) 0.317 (A) <1 (-) 0 (-) <0.05
rs28703956 chr4:709921 PCGF3 C - 13 A vs. G - - <1 (-) 26 (-) <0.05
rs62294151 chr4:791403 CPLX1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs79839061 chr4:705884 PCGF3 C - 13 A vs. G 0.092 (A) 0.125 (A) >1 (-) 28 (-) <0.05
rs150537577 chr4:705629 PCGF3 C - 13 A vs. G - - <1 (-) 28 (-) <0.05
rs12647181 chr4:701896 PCGF3 C - 13 A vs. G 0.05 (G) 0.092 (G) <1 (-) 29 (-) <0.05
rs79086820 chr4:699217 PCGF3 [-320bp] C - 13 C vs. G 0.092 (C) 0.133 (C) >1 (-) 29 (-) <0.05
rs147200445 chr4:773523 CPLX1 [-5222bp] C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs2242237 chr4:779394 CPLX1 All: C 108,990 15 G vs. A 0.275 (G) 0.2 (G) 1.05 (1.01-1.09) 0 (0-51) 0.005
rs13104259 chr4:701885 PCGF3 C - 13 T vs. C - - >1 (-) 24 (-) <0.05
rs75751670 chr4:701041 PCGF3 C - 13 A vs. G 0.092 (A) 0.133 (A) >1 (-) 32 (-) <0.05
rs3775141 chr4:783230 CPLX1 C - 13 A vs. C 0.433 (A) 0.317 (C) >1 (-) 5 (-) <0.05
rs28743077 chr4:708242 PCGF3 C - 13 T vs. C 0.125 (T) 0.2 (T) >1 (-) 0 (-) <0.05
rs3088106 chr4:781098 CPLX1 C - 13 T vs. C 0.408 (T) 0.342 (C) >1 (-) 2 (-) <0.05
rs3816683 chr4:781001 CPLX1 C - 13 A vs. G 0.425 (G) 0.292 (A) <1 (-) 2 (-) <0.05
rs73222804 chr4:752332 PCGF3 C - 12 A vs. G 0.275 (A) 0.092 (A) <1 (-) 9 (-) <0.05
rs147786984 chr4:808184 CPLX1 C - 12 A vs. G - - >1 (-) 35 (-) <0.05
rs4690314 chr4:790182 CPLX1 C - 13 T vs. C 0.417 (C) 0.408 (T) <1 (-) 0 (-) <0.05
chr4:707046 chr4:707046 PCGF3 C - 5 T vs. C - - >1 (-) 8 (-) <0.05
rs4690304 chr4:748447 PCGF3 C - 12 A vs. G 0.417 (G) 0.458 (A) >1 (-) 0 (-) <0.05
rs150203285 chr4:756713 PCGF3 C - 4 T vs. C - - <1 (-) 0 (-) <0.05
rs115135810 chr4:760696 PCGF3 C - 4 C vs. G 0.058 (C) - <1 (-) 0 (-) <0.05
rs115781025 chr4:701303 PCGF3 C - 13 T vs. C 0.042 (T) 0.133 (T) >1 (-) 31 (-) <0.05
rs1564279 chr4:776911 CPLX1 [-1834bp] C - 13 T vs. C 0.242 (C) 0.125 (C) <1 (-) 4 (-) <0.05
rs114081332 chr4:777519 CPLX1 [-1226bp] C - 4 T vs. G 0.05 (T) - <1 (-) 0 (-) <0.05
rs11722977 chr4:790757 CPLX1 C - 12 A vs. C 0.417 (C) 0.458 (A) <1 (-) 8 (-) <0.05
rs17165026 chr4:798511 CPLX1 C - 12 T vs. C 0.042 (T) 0.158 (T) >1 (-) 11 (-) <0.05
rs11723111 chr4:733045 PCGF3 C - 13 A vs. G 0.258 (A) 0.317 (A) <1 (-) 0 (-) <0.05
rs7660746 chr4:810151 CPLX1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs899390 chr4:746438 PCGF3 C - 6 T vs. G 0.075 (G) 0.0 (G) <1 (-) 55 (-) <0.05
rs13133410 chr4:733334 PCGF3 C - 13 T vs. C 0.258 (T) 0.333 (T) <1 (-) 0 (-) <0.05
rs11248037 chr4:734603 PCGF3 C - 13 T vs. C 0.258 (T) 0.333 (T) <1 (-) 0 (-) <0.05
rs13142139 chr4:729104 PCGF3 C - 12 T vs. C - - <1 (-) 0 (-) <0.05
rs35645043 chr4:742428 PCGF3 C - 8 A vs. G 0.033 (A) - >1 (-) 0 (-) <0.05
rs11725699 chr4:730560 PCGF3 C - 12 A vs. T - - <1 (-) 0 (-) <0.05
rs17164972 chr4:747810 PCGF3 C - 7 T vs. C 0.05 (T) 0.075 (T) <1 (-) 39 (-) <0.05
rs62294126 chr4:776153 CPLX1 [-2592bp] C - 12 T vs. C 0.033 (T) 0.058 (T) >1 (-) 19 (-) <0.05
rs12643640 chr4:736626 PCGF3 C - 13 T vs. G 0.258 (T) 0.333 (T) <1 (-) 0 (-) <0.05
rs28504502 chr4:803637 CPLX1 C - 13 T vs. C 0.033 (T) 0.017 (T) >1 (-) 0 (-) <0.05
rs4690191 chr4:742705 PCGF3 C - 13 T vs. C 0.258 (T) 0.325 (T) <1 (-) 0 (-) <0.05
rs4690301 chr4:742572 PCGF3 C - 13 T vs. C 0.25 (C) 0.333 (C) >1 (-) 0 (-) <0.05
rs899389 chr4:745971 PCGF3 C - 13 C vs. G 0.233 (G) 0.333 (G) >1 (-) 0 (-) <0.05
rs9332466 chr4:744098 PCGF3 C - 13 T vs. C 0.258 (C) 0.333 (C) >1 (-) 0 (-) <0.05
rs1531584 chr4:745445 PCGF3 C - 13 C vs. G 0.25 (C) 0.325 (C) <1 (-) 0 (-) <0.05
rs34910327 chr4:712048 PCGF3 C - 12 A vs. G 0.183 (A) 0.267 (A) <1 (-) 0 (-) <0.05

Association studies for this region [+]