PCGF3, chr4:699537-764428 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3775146 chr4:785228 CPLX1 C - 13 C vs. G 0.242 (C) 0.342 (C) >1 (-) 18 (-) <5.00e-08

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56074082 chr4:775919 CPLX1 [-2826bp] C - 12 C vs. G 0.067 (C) 0.05 (C) <1 (-) 13 (-) >0.05
rs6848474 chr4:769597 PCGF3 [+5169bp] C - 12 A vs. T 0.125 (A) 0.092 (A) >1 (-) 0 (-) >0.05
rs73222842 chr4:782157 CPLX1 C - 12 T vs. C 0.067 (C) - >1 (-) 14 (-) >0.05
rs3816679 chr4:781140 CPLX1 C - 12 A vs. G 0.075 (G) 0.025 (G) >1 (-) 13 (-) >0.05
rs73222841 chr4:781977 CPLX1 C - 12 C vs. G 0.05 (C) - <1 (-) 13 (-) >0.05
rs149429165 chr4:766589 PCGF3 [+2161bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs73207755 chr4:793822 CPLX1 C - 12 T vs. G 0.042 (T) 0.025 (T) <1 (-) 16 (-) >0.05
rs79985276 chr4:753746 PCGF3 C - 12 T vs. C 0.017 (C) - >1 (-) 2 (-) >0.05
rs73222810 chr4:755861 PCGF3 C - 12 A vs. G 0.067 (G) 0.058 (G) >1 (-) 18 (-) >0.05
rs28587502 chr4:790263 CPLX1 C - 12 A vs. G 0.042 (A) 0.025 (A) <1 (-) 16 (-) >0.05
rs78815751 chr4:654547 PDE6B C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs140920376 chr4:793747 CPLX1 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs74464382 chr4:652826 PDE6B C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs75012393 chr4:684396 MFSD7 [+1166bp] C - 13 C vs. G 0.1 (G) - >1 (-) 30 (-) >0.05
rs73222827 chr4:769259 PCGF3 [+4831bp] C - 12 A vs. G 0.067 (A) - <1 (-) 17 (-) >0.05
rs73222805 chr4:753815 PCGF3 C - 12 T vs. C 0.067 (C) - >1 (-) 17 (-) >0.05
rs73222832 chr4:773025 CPLX1 [-5720bp] C - 12 A vs. G 0.067 (A) - <1 (-) 16 (-) >0.05
rs73222831 chr4:772696 CPLX1 [-6049bp] C - 12 A vs. G 0.067 (A) - <1 (-) 16 (-) >0.05
rs34703682 chr4:751388 PCGF3 C - 13 A vs. G 0.167 (A) 0.108 (A) >1 (-) 26 (-) >0.05
rs36031899 chr4:751173 PCGF3 C - 13 A vs. G 0.175 (A) 0.108 (A) >1 (-) 26 (-) >0.05
rs6840352 chr4:774574 CPLX1 [-4171bp] C - 13 A vs. G 0.192 (G) 0.125 (G) <1 (-) 21 (-) >0.05
rs11730652 chr4:694613 PCGF3 [-4924bp] C - 4 T vs. C 0.083 (T) 0.492 (T) >1 (-) 0 (-) >0.05
rs143574218 chr4:801202 CPLX1 C - 12 T vs. C - - >1 (-) 26 (-) >0.05
rs7696341 chr4:768292 PCGF3 [+3864bp] C - 13 A vs. G - - >1 (-) 22 (-) >0.05
rs6841958 chr4:738512 PCGF3 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs9998786 chr4:678788 MFSD7 C - 13 T vs. C 0.125 (C) 0.058 (C) >1 (-) 44 (-) >0.05
rs79832740 chr4:729984 PCGF3 C - 12 A vs. C - - <1 (-) 4 (-) >0.05
rs116320846 chr4:779535 CPLX1 C - 12 C vs. G 0.067 (C) - <1 (-) 6 (-) >0.05
rs116368462 chr4:683017 MFSD7 C - 13 A vs. G 0.1 (A) - <1 (-) 31 (-) >0.05
rs13138362 chr4:756986 PCGF3 C - 13 T vs. C 0.192 (C) 0.108 (C) <1 (-) 17 (-) >0.05
rs57003523 chr4:761371 PCGF3 C - 13 T vs. C 0.208 (T) 0.108 (T) >1 (-) 18 (-) >0.05
rs11935678 chr4:758354 PCGF3 C - 13 T vs. C 0.192 (T) 0.117 (T) >1 (-) 17 (-) >0.05
rs11931963 chr4:758358 PCGF3 C - 13 A vs. G 0.192 (A) 0.117 (A) >1 (-) 17 (-) >0.05
rs11724726 chr4:694615 PCGF3 [-4922bp] C - 4 C vs. G 0.075 (G) 0.492 (G) <1 (-) 0 (-) >0.05
rs28655411 chr4:672177 MYL5 C - 13 C vs. G 0.142 (C) 0.258 (C) <1 (-) 36 (-) >0.05
rs116067312 chr4:669743 MYL5 C - 3 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs3822027 chr4:778275 CPLX1 [-470bp] C - 13 T vs. C 0.158 (C) - >1 (-) 26 (-) >0.05
rs7663102 chr4:702843 PCGF3 C - 12 T vs. C 0.058 (T) 0.025 (T) <1 (-) 16 (-) >0.05
rs13116062 chr4:783969 CPLX1 C - 13 T vs. G 0.192 (G) 0.125 (G) <1 (-) 21 (-) >0.05
rs73219300 chr4:706034 PCGF3 C - 12 A vs. T 0.058 (T) 0.025 (T) >1 (-) 16 (-) >0.05
rs3816674 chr4:781720 CPLX1 C - 13 T vs. C 0.192 (C) 0.125 (C) <1 (-) 23 (-) >0.05
rs13130087 chr4:783628 CPLX1 C - 13 T vs. G 0.175 (T) 0.108 (T) >1 (-) 23 (-) >0.05
rs3775139 chr4:782261 CPLX1 C - 13 A vs. G 0.192 (A) 0.125 (A) >1 (-) 23 (-) >0.05
rs2306251 chr4:786401 CPLX1 C - 13 T vs. C 0.458 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs1052595 chr4:779213 CPLX1 C - 13 A vs. C 0.45 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs73221106 chr4:707600 PCGF3 C - 12 A vs. G 0.058 (A) - <1 (-) 16 (-) >0.05
rs9998158 chr4:794243 CPLX1 C - 13 A vs. G 0.183 (A) - >1 (-) 0 (-) >0.05
rs79776813 chr4:802307 CPLX1 C - 8 A vs. G 0.008 (A) - >1 (-) 54 (-) >0.05
rs3775138 chr4:782061 CPLX1 C - 13 T vs. C 0.175 (C) 0.117 (C) <1 (-) 21 (-) >0.05
rs28685840 chr4:807523 CPLX1 C - 13 A vs. C 0.475 (A) 0.292 (A) <1 (-) 13 (-) >0.05

Association studies for this region [+]