PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242490 chr17:17393236 MED9 C - 13 C vs. G 0.258 (G) 0.242 (C) >1 (-) 0 (-) >0.05
rs73290129 chr17:17538372 PEMT [+43350bp] C - 13 T vs. C 0.025 (T) 0.3 (T) >1 (-) 0 (-) >0.05
rs28435349 chr17:17403178 RASD1 [+3469bp] C - 13 T vs. C 0.258 (C) 0.242 (T) >1 (-) 0 (-) >0.05
rs112598555 chr17:17439338 PEMT C - 13 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs70963012 chr17:17423897 PEMT C - 10 A vs. T 0.033 (A) - >1 (-) 10 (-) >0.05
rs56044345 chr17:17518025 PEMT [+23003bp] C - 13 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs36006686 chr17:17535484 PEMT [+40462bp] C - 13 C vs. G 0.075 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs4646407 chr17:17412032 PEMT C - 13 C vs. G 0.108 (G) 0.492 (G) >1 (-) 0 (-) >0.05
rs4924797 chr17:17530248 PEMT [+35226bp] C - 13 C vs. G 0.075 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs7219777 chr17:17529823 PEMT [+34801bp] C - 13 A vs. G 0.075 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs2232831 chr17:17400049 RASD1 [+340bp] C - 13 A vs. T 0.258 (A) 0.217 (T) <1 (-) 0 (-) >0.05
rs1263507 chr17:17373571 MED9 [-6729bp] C - 13 A vs. G 0.192 (A) 0.25 (G) <1 (-) 0 (-) >0.05
rs78107146 chr17:17534906 PEMT [+39884bp] C - 13 A vs. G 0.017 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs4924868 chr17:17397512 RASD1 [-239bp] C - 13 A vs. G 0.275 (G) 0.242 (A) >1 (-) 0 (-) >0.05
rs12600976 chr17:17532577 PEMT [+37555bp] C - 13 A vs. G 0.05 (G) 0.292 (G) >1 (-) 0 (-) >0.05
rs8074272 chr17:17534415 PEMT [+39393bp] C - 13 A vs. C 0.075 (C) 0.283 (C) >1 (-) 0 (-) >0.05
rs9896880 chr17:17535911 PEMT [+40889bp] C - 13 A vs. G 0.075 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs66637059 chr17:17417808 PEMT C - 13 T vs. C 0.258 (T) - >1 (-) 0 (-) >0.05
rs55844525 chr17:17535133 PEMT [+40111bp] C - 13 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs4924853 chr17:17363096 MED9 [-17204bp] C - 13 T vs. C 0.125 (T) 0.375 (T) <1 (-) 0 (-) >0.05
rs1242493 chr17:17374643 MED9 [-5657bp] C - 13 A vs. G 0.192 (G) - >1 (-) 0 (-) >0.05
rs7219976 chr17:17404524 PEMT [-4353bp] C - 13 A vs. G 0.275 (G) 0.25 (A) >1 (-) 0 (-) >0.05
rs1969488 chr17:17360916 MED9 [-19384bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs9893413 chr17:17422498 PEMT C - 11 A vs. G 0.025 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs60410257 chr17:17536919 PEMT [+41897bp] C - 13 T vs. C 0.025 (T) 0.292 (T) >1 (-) 0 (-) >0.05
rs7220132 chr17:17404586 PEMT [-4291bp] C - 13 A vs. G 0.275 (G) 0.242 (A) >1 (-) 0 (-) >0.05
rs147675831 chr17:17422697 PEMT C - 6 A vs. C - - >1 (-) 0 (-) >0.05
rs12935886 chr17:17425002 PEMT C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs4646405 chr17:17418594 PEMT C - 13 A vs. G 0.358 (A) 0.483 (A) <1 (-) 13 (-) >0.05
rs4924890 chr17:17403830 RASD1 [+4121bp] C - 13 T vs. C 0.258 (T) 0.242 (C) <1 (-) 0 (-) >0.05
rs186479218 chr17:17514852 PEMT [+19830bp] C - 11 C vs. G - - <1 (-) 5 (-) >0.05
rs57226466 chr17:17534054 PEMT [+39032bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11869142 chr17:17428278 PEMT C - 13 T vs. C - - >1 (-) 2 (-) >0.05
rs7220217 chr17:17404819 PEMT [-4058bp] C - 13 T vs. C 0.275 (C) 0.242 (T) >1 (-) 0 (-) >0.05
rs12938634 chr17:17404886 PEMT [-3991bp] C - 13 A vs. G 0.275 (G) 0.242 (A) >1 (-) 0 (-) >0.05
rs73290131 chr17:17538564 PEMT [+43542bp] C - 13 T vs. C 0.017 (T) 0.292 (T) >1 (-) 0 (-) >0.05
rs1242476 chr17:17360059 MED9 [-20241bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs4479310 chr17:17405504 PEMT [-3373bp] C - 13 T vs. C 0.275 (C) 0.242 (T) >1 (-) 0 (-) >0.05
rs7225010 chr17:17539065 PEMT [+44043bp] C - 12 A vs. G - - <1 (-) 5 (-) >0.05
rs55793618 chr17:17530353 PEMT [+35331bp] C - 13 T vs. G 0.025 (T) 0.3 (T) >1 (-) 0 (-) >0.05
rs112069496 chr17:17533727 PEMT [+38705bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs138244453 chr17:17481361 PEMT C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs61030109 chr17:17534413 PEMT [+39391bp] C - 13 A vs. C 0.025 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs77911758 chr17:17492654 PEMT C - 13 A vs. G 0.033 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs4924891 chr17:17403874 RASD1 [+4165bp] C - 13 T vs. C 0.258 (C) 0.242 (T) >1 (-) 0 (-) >0.05
rs73290118 chr17:17536007 PEMT [+40985bp] C - 13 A vs. G 0.025 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs4646385 chr17:17448691 PEMT C - 13 A vs. G 0.433 (A) 0.267 (G) <1 (-) 0 (-) >0.05
rs73290119 chr17:17536080 PEMT [+41058bp] C - 13 C vs. G 0.025 (G) 0.3 (G) <1 (-) 0 (-) >0.05
rs7209194 chr17:17536415 PEMT [+41393bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7209666 chr17:17536507 PEMT [+41485bp] C - 13 C vs. G 0.025 (C) 0.3 (C) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.