PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05
rs118033952 chr17:17508577 PEMT [+13555bp] C - 8 T vs. C - 0.05 (T) <1 (-) 0 (-) <0.05
rs150309697 chr17:17432743 PEMT C - 8 T vs. C - - <1 (-) 0 (-) <0.05
rs11659047 chr17:17543412 RAI1 [-41375bp] C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs748196 chr17:17422768 PEMT C - 13 T vs. G 0.417 (T) 0.442 (G) <1 (-) 9 (-) >0.05
rs144391026 chr17:17396464 MED9 C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs1242513 chr17:17383820 MED9 C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs57638011 chr17:17535277 PEMT [+40255bp] C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs8077671 chr17:17530984 PEMT [+35962bp] C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs9910151 chr17:17528547 PEMT [+33525bp] C - 13 T vs. G 0.05 (T) - <1 (-) 0 (-) >0.05
rs28715719 chr17:17535436 PEMT [+40414bp] C - 13 C vs. G 0.05 (G) - >1 (-) 0 (-) >0.05
rs8074981 chr17:17534854 PEMT [+39832bp] C - 13 A vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs56327101 chr17:17535138 PEMT [+40116bp] C - 13 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs8076601 chr17:17531017 PEMT [+35995bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs28884183 chr17:17533489 PEMT [+38467bp] C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs28454257 chr17:17532282 PEMT [+37260bp] C - 13 A vs. T 0.05 (A) - <1 (-) 0 (-) >0.05
rs7219568 chr17:17529606 PEMT [+34584bp] C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs9896285 chr17:17535847 PEMT [+40825bp] C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs9903503 chr17:17457227 PEMT C - 13 C vs. G 0.05 (G) - >1 (-) 0 (-) >0.05
rs62066215 chr17:17540249 RAI1 [-44538bp] C - 13 A vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs147671744 chr17:17460540 PEMT C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs56177028 chr17:17534989 PEMT [+39967bp] C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs1242504 chr17:17367215 MED9 [-13085bp] C - 13 T vs. C 0.1 (T) 0.425 (T) <1 (-) 0 (-) >0.05
rs116532931 chr17:17431320 PEMT C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs78643588 chr17:17526835 PEMT [+31813bp] C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs9914118 chr17:17525424 PEMT [+30402bp] C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs62066216 chr17:17541057 RAI1 [-43730bp] C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs9911823 chr17:17530465 PEMT [+35443bp] C - 13 A vs. G 0.05 (A) - <1 (-) 12 (-) >0.05
rs7222759 chr17:17526049 PEMT [+31027bp] C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs4924892 chr17:17403967 RASD1 [+4258bp] C - 13 T vs. C 0.175 (C) 0.417 (C) >1 (-) 16 (-) >0.05
rs1242497 chr17:17377290 MED9 [-3010bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs8072971 chr17:17391443 MED9 C - 13 C vs. G 0.1 (C) 0.417 (C) <1 (-) 0 (-) >0.05
rs80300717 chr17:17533280 PEMT [+38258bp] C - 13 T vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs13342397 chr17:17460926 PEMT C - 13 T vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs28636952 chr17:17462506 PEMT C - 13 T vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs8074742 chr17:17455196 PEMT C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs11653380 chr17:17403534 RASD1 [+3825bp] C - 13 A vs. G 0.1 (G) 0.417 (G) >1 (-) 0 (-) >0.05
rs7216223 chr17:17437297 PEMT C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs4646395 chr17:17440516 PEMT C - 13 A vs. G 0.442 (G) 0.408 (A) >1 (-) 0 (-) >0.05
rs1242516 chr17:17387079 MED9 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs9905032 chr17:17457768 PEMT C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs746900 chr17:17426127 PEMT C - 13 A vs. T 0.45 (T) 0.25 (A) >1 (-) 6 (-) >0.05
rs11651957 chr17:17497409 PEMT [+2387bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs9897362 chr17:17456746 PEMT C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs11654553 chr17:17462149 PEMT C - 13 A vs. C 0.05 (A) - <1 (-) 0 (-) >0.05
rs1242492 chr17:17374391 MED9 [-5909bp] C - 13 T vs. C 0.492 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs1268855 chr17:17366504 MED9 [-13796bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs7225421 chr17:17463419 PEMT C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs75051508 chr17:17455464 PEMT C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs936108 chr17:17439793 PEMT C - 13 T vs. C 0.433 (C) 0.267 (T) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.