PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs148127043 chr17:17401906 RASD1 [+2197bp] C - 10 T vs. C - - >1 (-) 26 (-) >0.05
rs75593451 chr17:17537858 PEMT [+42836bp] C - 11 A vs. G 0.025 (A) - >1 (-) 34 (-) >0.05
rs73294357 chr17:17427004 PEMT C - 13 A vs. T 0.058 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs3785499 chr17:17415217 PEMT C - 13 T vs. C 0.433 (T) 0.133 (C) <1 (-) 9 (-) >0.05
rs9894321 chr17:17438085 PEMT C - 13 T vs. C 0.375 (T) 0.392 (C) <1 (-) 0 (-) >0.05
rs4646410 chr17:17408699 PEMT [-178bp] C - 13 A vs. G 0.3 (G) 0.25 (A) >1 (-) 0 (-) >0.05
rs56180978 chr17:17418035 PEMT C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs4646390 chr17:17443090 PEMT C - 13 A vs. G 0.375 (A) 0.408 (G) <1 (-) 0 (-) >0.05
rs2660830 chr17:17360050 MED9 [-20250bp] C - 13 T vs. C - - >1 (-) 2 (-) >0.05
rs116934548 chr17:17445825 PEMT C - 9 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs113081058 chr17:17443532 PEMT C - 5 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs35277795 chr17:17415893 PEMT C - 8 T vs. C 0.033 (T) - <1 (-) 32 (-) >0.05
rs744925 chr17:17467501 PEMT C - 13 A vs. G 0.45 (G) 0.275 (A) >1 (-) 0 (-) >0.05
rs147323608 chr17:17466147 PEMT C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs4924852 chr17:17362082 MED9 [-18218bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs1269402 chr17:17361137 MED9 [-19163bp] C - 13 T vs. C 0.208 (T) 0.283 (C) <1 (-) 0 (-) >0.05
rs117059489 chr17:17422565 PEMT C - 3 T vs. C 0.017 (C) - <1 (-) 41 (-) >0.05
rs75403885 chr17:17429471 PEMT C - 13 A vs. G 0.058 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs7946 chr17:17409560 PEMT C - 13 T vs. C 0.275 (C) 0.192 (T) >1 (-) 0 (-) >0.05
rs4646406 chr17:17417169 PEMT C - 13 A vs. T 0.433 (T) 0.133 (A) >1 (-) 0 (-) >0.05
rs149595520 chr17:17370436 MED9 [-9864bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs1242509 chr17:17363784 MED9 [-16516bp] C - 13 A vs. C 0.15 (A) 0.35 (C) <1 (-) 0 (-) >0.05
rs75220852 chr17:17511713 PEMT [+16691bp] C - 13 A vs. G 0.133 (G) 0.358 (G) >1 (-) 0 (-) >0.05
rs1809205 chr17:17511512 PEMT [+16490bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs56745821 chr17:17509992 PEMT [+14970bp] C - 13 A vs. G 0.133 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs77410501 chr17:17376102 MED9 [-4198bp] C - 13 A vs. G 0.058 (G) - >1 (-) 57 (-) >0.05
rs9890064 chr17:17538008 PEMT [+42986bp] C - 12 A vs. C 0.417 (C) 0.392 (A) <1 (-) 0 (-) >0.05
rs137924563 chr17:17391964 MED9 C - 9 C vs. G - - <1 (-) 54 (-) >0.05
rs9911672 chr17:17528670 PEMT [+33648bp] C - 13 T vs. C 0.475 (T) 0.058 (C) >1 (-) 0 (-) >0.05
rs4646356 chr17:17471175 PEMT C - 13 A vs. G 0.45 (G) 0.267 (A) >1 (-) 0 (-) >0.05
rs4646358 chr17:17470708 PEMT C - 13 A vs. G 0.467 (A) 0.275 (G) <1 (-) 0 (-) >0.05
rs4646359 chr17:17470609 PEMT C - 13 T vs. C 0.45 (C) 0.275 (T) >1 (-) 0 (-) >0.05
rs1531100 chr17:17464828 PEMT C - 13 A vs. G 0.45 (G) 0.275 (A) >1 (-) 0 (-) >0.05
rs8064566 chr17:17511057 PEMT [+16035bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs4646352 chr17:17473853 PEMT C - 13 T vs. C 0.45 (C) 0.275 (T) >1 (-) 0 (-) >0.05
rs1918249 chr17:17409709 PEMT C - 13 A vs. T 0.275 (T) 0.142 (A) >1 (-) 0 (-) >0.05
rs4925027 chr17:17513858 PEMT [+18836bp] C - 13 T vs. C 0.133 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs1242495 chr17:17375316 MED9 [-4984bp] C - 13 T vs. C 0.392 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs12453139 chr17:17515891 PEMT [+20869bp] C - 13 T vs. G 0.133 (G) 0.35 (G) >1 (-) 0 (-) >0.05
rs897450 chr17:17475350 PEMT C - 13 T vs. G 0.45 (T) 0.275 (G) <1 (-) 0 (-) >0.05
rs8076796 chr17:17531215 PEMT [+36193bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs72828488 chr17:17467380 PEMT C - 4 A vs. G 0.05 (G) - <1 (-) 12 (-) >0.05
rs4646365 chr17:17467783 PEMT C - 13 T vs. C 0.45 (C) 0.275 (T) >1 (-) 0 (-) >0.05
rs70959697 chr17:17426645 PEMT C - 4 T vs. C 0.017 (T) - >1 (-) 51 (-) >0.05
rs145915223 chr17:17491114 PEMT C - 11 T vs. C - - >1 (-) 6 (-) >0.05
rs12939945 chr17:17476914 PEMT C - 13 T vs. C 0.458 (T) 0.275 (C) <1 (-) 0 (-) >0.05
rs7219757 chr17:17529042 PEMT [+34020bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs73292346 chr17:17383764 MED9 C - 13 C vs. G 0.067 (C) - <1 (-) 57 (-) >0.05
rs747770 chr17:17446103 PEMT C - 13 T vs. C 0.375 (T) 0.408 (C) <1 (-) 0 (-) >0.05
rs11871667 chr17:17477847 PEMT C - 13 T vs. C - - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.