PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4646367 chr17:17466414 PEMT C - 13 T vs. C 0.025 (C) 0.083 (C) <1 (-) 16 (-) >0.05
rs12939598 chr17:17508878 PEMT [+13856bp] C - 13 C vs. G 0.45 (G) 0.042 (G) <1 (-) 0 (-) >0.05
rs1108740 chr17:17394915 MED9 C - 13 A vs. T 0.033 (A) - <1 (-) 52 (-) >0.05
rs4646348 chr17:17474307 PEMT C - 13 A vs. G 0.033 (A) 0.042 (A) >1 (-) 22 (-) >0.05
rs11869600 chr17:17504856 PEMT [+9834bp] C - 13 A vs. G 0.45 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs57417963 chr17:17455469 PEMT C - 13 T vs. C - - <1 (-) 17 (-) >0.05
rs58810148 chr17:17455778 PEMT C - 13 A vs. T 0.033 (T) 0.075 (T) <1 (-) 17 (-) >0.05
rs58956930 chr17:17455871 PEMT C - 13 T vs. G 0.033 (G) 0.1 (G) <1 (-) 17 (-) >0.05
rs58356850 chr17:17482727 PEMT C - 13 T vs. C - - >1 (-) 15 (-) >0.05
rs4646380 chr17:17456604 PEMT C - 13 A vs. G 0.033 (A) 0.083 (A) >1 (-) 17 (-) >0.05
rs4646379 chr17:17456643 PEMT C - 13 A vs. G 0.033 (A) 0.058 (A) >1 (-) 17 (-) >0.05
rs143615775 chr17:17394104 MED9 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs7210045 chr17:17476031 PEMT C - 10 A vs. T 0.008 (A) 0.142 (A) >1 (-) 0 (-) >0.05
rs73298590 chr17:17475880 PEMT C - 10 A vs. G 0.008 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs73298588 chr17:17475107 PEMT C - 10 T vs. C - 0.142 (T) >1 (-) 0 (-) >0.05
rs73298555 chr17:17465423 PEMT C - 10 T vs. G - - <1 (-) 0 (-) >0.05
rs73292350 chr17:17385002 MED9 C - 13 T vs. C 0.067 (C) - >1 (-) 59 (-) >0.05
rs8081810 chr17:17522944 PEMT [+27922bp] C - 12 T vs. C 0.083 (C) 0.333 (C) <1 (-) 0 (-) >0.05
rs4646366 chr17:17466737 PEMT C - 10 A vs. G 0.008 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs8066187 chr17:17467017 PEMT C - 10 T vs. C - 0.142 (C) <1 (-) 0 (-) >0.05
rs8065788 chr17:17467282 PEMT C - 10 C vs. G - 0.142 (C) >1 (-) 0 (-) >0.05
rs4646360 chr17:17469455 PEMT C - 10 T vs. C 0.008 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs4646361 chr17:17469319 PEMT C - 10 C vs. G - 0.142 (G) <1 (-) 0 (-) >0.05
rs4646362 chr17:17468641 PEMT C - 10 C vs. G - 0.142 (G) <1 (-) 0 (-) >0.05
rs4646364 chr17:17467968 PEMT C - 10 T vs. C 0.008 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs4646363 chr17:17468141 PEMT C - 10 C vs. G - 0.142 (G) <1 (-) 0 (-) >0.05
rs138856085 chr17:17512458 PEMT [+17436bp] C - 10 A vs. G - - <1 (-) 20 (-) >0.05
rs73292351 chr17:17385423 MED9 C - 13 T vs. C 0.067 (C) - >1 (-) 56 (-) >0.05
rs1020696 chr17:17408484 PEMT [-393bp] C - 13 T vs. C 0.108 (C) 0.342 (C) <1 (-) 0 (-) >0.05
rs142128254 chr17:17489526 PEMT C - 11 A vs. C - - <1 (-) 0 (-) >0.05
rs3760187 chr17:17487576 PEMT C - 13 T vs. C - - >1 (-) 15 (-) >0.05
rs12949336 chr17:17509063 PEMT [+14041bp] C - 13 A vs. T 0.45 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs2278952 chr17:17485584 PEMT C - 13 A vs. G 0.033 (A) 0.05 (A) >1 (-) 15 (-) >0.05
rs62066209 chr17:17520784 PEMT [+25762bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs9891282 chr17:17508481 PEMT [+13459bp] C - 13 C vs. G 0.1 (G) 0.342 (G) >1 (-) 1 (-) >0.05
rs1020697 chr17:17411030 PEMT C - 13 A vs. G - 0.05 (G) <1 (-) 0 (-) >0.05
rs149746355 chr17:17472776 PEMT C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs3816512 chr17:17409683 PEMT C - 13 T vs. C 0.083 (T) 0.233 (T) >1 (-) 0 (-) >0.05
rs12941217 chr17:17503206 PEMT [+8184bp] C - 13 A vs. G 0.45 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs12951181 chr17:17502453 PEMT [+7431bp] C - 13 T vs. C 0.45 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs141129480 chr17:17360804 MED9 [-19496bp] C - 3 T vs. C - - <1 (-) 27 (-) >0.05
rs76219957 chr17:17436708 PEMT C - 13 T vs. C 0.042 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs11869492 chr17:17525476 PEMT [+30454bp] C - 13 T vs. C 0.392 (T) 0.358 (C) >1 (-) 0 (-) >0.05
rs143904201 chr17:17483274 PEMT C - 3 T vs. C - - <1 (-) 39 (-) >0.05
rs12937108 chr17:17499544 PEMT [+4522bp] C - 13 T vs. C 0.45 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs4646371 chr17:17460674 PEMT C - 13 A vs. G 0.483 (G) 0.192 (A) >1 (-) 0 (-) >0.05
rs35851484 chr17:17507905 PEMT [+12883bp] C - 13 A vs. G 0.45 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs58146226 chr17:17463884 PEMT C - 13 A vs. G 0.033 (A) 0.083 (A) >1 (-) 22 (-) >0.05
rs16961756 chr17:17359619 MED9 [-20681bp] C - 13 A vs. G 0.042 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs12946845 chr17:17509010 PEMT [+13988bp] C - 13 A vs. C 0.45 (C) 0.05 (C) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.