PGS1, chr17:76374721-76421195 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4969188 chr17:76422473 DNAH17 All: C 108,990 15 T vs. C 0.258 (T) 0.042 (T) 0.92 (0.88-0.96) 0 (0-33) 5.75e-05
Meta_image?name=rs4969188

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs116552087 chr17:76424217 DNAH17 C - 7 A vs. G 0.175 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs116246792 chr17:76424219 DNAH17 C - 7 A vs. G 0.175 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs8070205 chr17:76452217 DNAH17 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs7219215 chr17:76395169 PGS1 C - 13 T vs. C 0.142 (C) 0.275 (C) >1 (-) 0 (-) >0.05
rs9891614 chr17:76360050 SOCS3 [+3892bp] C - 12 A vs. G 0.342 (G) 0.183 (A) >1 (-) 0 (-) >0.05
rs12452647 chr17:76378917 PGS1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs8071287 chr17:76452181 DNAH17 C - 9 T vs. G - - <1 (-) 49 (-) >0.05
rs72925845 chr17:76439361 DNAH17 C - 12 A vs. G 0.175 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs72911393 chr17:76391005 PGS1 C - 13 T vs. C 0.142 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs12453219 chr17:76392756 PGS1 C - 13 C vs. G 0.142 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs4969172 chr17:76365791 PGS1 [-8930bp] C - 12 T vs. C 0.342 (T) 0.175 (C) <1 (-) 0 (-) >0.05
rs4969170 chr17:76360538 SOCS3 [+4380bp] C - 12 A vs. G 0.342 (A) 0.183 (G) <1 (-) 0 (-) >0.05
rs73380049 chr17:76448445 DNAH17 C - 9 T vs. C - - >1 (-) 3 (-) >0.05
rs75599905 chr17:76361175 SOCS3 [+5017bp] C - 9 C vs. G 0.075 (C) - >1 (-) 0 (-) >0.05
rs72911377 chr17:76381463 PGS1 C - 13 A vs. G 0.15 (A) - <1 (-) 0 (-) >0.05
rs56101241 chr17:76403923 PGS1 C - 4 C vs. G - - <1 (-) 43 (-) >0.05
rs7222391 chr17:76326637 SOCS3 [-26227bp] C - 11 A vs. G 0.075 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs12451056 chr17:76396188 PGS1 C - 13 T vs. C 0.142 (T) 0.283 (T) <1 (-) 0 (-) >0.05
rs6501206 chr17:76364053 SOCS3 [+7895bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs58470902 chr17:76471136 DNAH17 C - 13 A vs. G 0.067 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs2289751 chr17:76449505 DNAH17 C - 12 C vs. G 0.3 (G) 0.442 (G) <1 (-) 0 (-) >0.05
rs8070204 chr17:76364207 SOCS3 [+8049bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs114571179 chr17:76329742 SOCS3 [-23122bp] C - 7 A vs. G 0.042 (A) - <1 (-) 25 (-) >0.05
rs1965410 chr17:76345532 SOCS3 [-7332bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs4969184 chr17:76393413 PGS1 C - 13 A vs. G 0.475 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs73998044 chr17:76344085 SOCS3 [-8779bp] C - 12 T vs. C 0.067 (T) 0.008 (T) <1 (-) 0 (-) >0.05
rs4969187 chr17:76405837 PGS1 C - 13 T vs. C 0.35 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs113776314 chr17:76343435 SOCS3 [-9429bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs55944126 chr17:76363624 SOCS3 [+7466bp] C - 13 A vs. G 0.033 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs4969143 chr17:76405736 PGS1 C - 13 T vs. C 0.342 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs8074003 chr17:76364493 SOCS3 [+8335bp] C - 13 T vs. C 0.042 (T) 0.108 (T) <1 (-) 0 (-) >0.05
rs55959237 chr17:76364626 SOCS3 [+8468bp] C - 13 T vs. C 0.042 (T) 0.108 (T) <1 (-) 0 (-) >0.05
rs68154225 chr17:76368916 PGS1 [-5805bp] C - 13 C vs. G 0.05 (C) 0.108 (C) <1 (-) 0 (-) >0.05
rs4129767 chr17:76403984 PGS1 C - 13 A vs. G 0.467 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs56394367 chr17:76363421 SOCS3 [+7263bp] C - 13 C vs. G 0.05 (C) 0.3 (C) <1 (-) 0 (-) >0.05
rs72911386 chr17:76386984 PGS1 C - 13 A vs. T 0.15 (T) 0.283 (T) >1 (-) 0 (-) >0.05
rs6501201 chr17:76334905 SOCS3 [-17959bp] C - 12 T vs. C 0.392 (T) 0.325 (T) <1 (-) 25 (-) >0.05
rs4969142 chr17:76398304 PGS1 C - 13 A vs. G 0.45 (G) 0.492 (A) <1 (-) 0 (-) >0.05
rs141612616 chr17:76395910 PGS1 C - 4 C vs. G - - <1 (-) 0 (-) >0.05
rs55935021 chr17:76366865 PGS1 [-7856bp] C - 13 T vs. G 0.05 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs9916590 chr17:76363223 SOCS3 [+7065bp] C - 13 A vs. T 0.033 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs9914196 chr17:76362868 SOCS3 [+6710bp] C - 13 A vs. C 0.05 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs56203718 chr17:76362772 SOCS3 [+6614bp] C - 13 A vs. G 0.025 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs9914220 chr17:76362890 SOCS3 [+6732bp] C - 13 T vs. C 0.05 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs68037230 chr17:76359013 SOCS3 [+2855bp] C - 13 C vs. G 0.042 (G) 0.075 (G) >1 (-) 0 (-) >0.05
rs28415866 chr17:76362553 SOCS3 [+6395bp] C - 13 C vs. G 0.05 (C) 0.3 (C) <1 (-) 0 (-) >0.05
rs4969182 chr17:76393030 PGS1 C - 13 T vs. C 0.467 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs72899784 chr17:76367670 PGS1 [-7051bp] C - 13 T vs. C 0.017 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs76600184 chr17:76368534 PGS1 [-6187bp] C - 13 A vs. G 0.05 (G) 0.108 (G) >1 (-) 0 (-) >0.05
rs2376583 chr17:76402105 PGS1 C - 13 A vs. T 0.475 (A) 0.5 (A) >1 (-) 0 (-) >0.05

Association studies for this region [+]