PGS1, chr17:76374721-76421195 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4969188 chr17:76422473 DNAH17 All: C 108,990 15 T vs. C 0.258 (T) 0.042 (T) 0.92 (0.88-0.96) 0 (0-33) 5.75e-05
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs55938653 chr17:76383671 PGS1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs66873412 chr17:76360352 SOCS3 [+4194bp] C - 13 A vs. C 0.042 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs7222563 chr17:76365484 PGS1 [-9237bp] C - 13 A vs. G 0.058 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs7219674 chr17:76390197 PGS1 C - 12 A vs. G - - >1 (-) 3 (-) >0.05
rs72921239 chr17:76406802 PGS1 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs4969141 chr17:76391653 PGS1 C - 13 T vs. C 0.483 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs4969189 chr17:76444858 DNAH17 C - 10 T vs. C 0.35 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs112747750 chr17:76363991 SOCS3 [+7833bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs11657860 chr17:76387244 PGS1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs28539061 chr17:76362713 SOCS3 [+6555bp] C - 13 A vs. G 0.05 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs692300 chr17:76464436 DNAH17 C - 13 C vs. G 0.225 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs57367119 chr17:76367052 PGS1 [-7669bp] C - 13 A vs. G 0.05 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs7219625 chr17:76390080 PGS1 C - 13 T vs. C 0.492 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs60850844 chr17:76456900 DNAH17 C - 13 A vs. G 0.05 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs55925148 chr17:76363479 SOCS3 [+7321bp] C - 13 T vs. C 0.033 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs11657987 chr17:76387363 PGS1 C - 13 T vs. G 0.467 (G) 0.367 (T) <1 (-) 0 (-) >0.05
rs116994828 chr17:76347598 SOCS3 [-5266bp] C - 7 T vs. C 0.017 (T) - <1 (-) 37 (-) >0.05
rs74833757 chr17:76398894 PGS1 C - 13 T vs. C 0.083 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs76123789 chr17:76371276 PGS1 [-3445bp] C - 13 T vs. C 0.075 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs12948394 chr17:76382791 PGS1 C - 13 T vs. C 0.442 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs113854389 chr17:76376236 PGS1 C - 13 T vs. C 0.067 (T) - <1 (-) 0 (-) >0.05
rs2292644 chr17:76394449 PGS1 C - 13 T vs. C 0.375 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs1133845 chr17:76342215 SOCS3 [-10649bp] C - 12 T vs. C 0.067 (T) - <1 (-) 0 (-) >0.05
rs77483524 chr17:76404280 PGS1 C - 12 A vs. G 0.117 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs111661128 chr17:76403698 PGS1 C - 13 A vs. G 0.025 (A) - <1 (-) 20 (-) >0.05
rs72899798 chr17:76372972 PGS1 [-1749bp] C - 13 T vs. C 0.058 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs12449574 chr17:76463910 DNAH17 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs692284 chr17:76458240 DNAH17 C - 12 T vs. C 0.208 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs17642134 chr17:76333353 SOCS3 [-19511bp] C - 9 A vs. G 0.042 (A) - >1 (-) 31 (-) >0.05
rs72911373 chr17:76373028 PGS1 [-1693bp] C - 13 T vs. C 0.058 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs55655829 chr17:76468843 DNAH17 C - 13 T vs. C 0.108 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs56063946 chr17:76468839 DNAH17 C - 13 T vs. C 0.108 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs9892622 chr17:76346122 SOCS3 [-6742bp] C - 9 A vs. G 0.383 (G) 0.475 (A) >1 (-) 21 (-) >0.05
rs55955947 chr17:76468908 DNAH17 C - 13 A vs. G 0.108 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs7208791 chr17:76327866 SOCS3 [-24998bp] C - 12 A vs. G - - >1 (-) 44 (-) >0.05
rs4366775 chr17:76382079 PGS1 C - 13 T vs. C 0.458 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs3744220 chr17:76400230 PGS1 C - 12 A vs. G 0.083 (A) 0.408 (A) <1 (-) 2 (-) >0.05
rs112884867 chr17:76336094 SOCS3 [-16770bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs55962646 chr17:76342920 SOCS3 [-9944bp] C - 9 T vs. C 0.1 (C) 0.25 (C) >1 (-) 7 (-) >0.05
rs938348 chr17:76381021 PGS1 C - 13 T vs. C 0.442 (C) 0.333 (T) <1 (-) 0 (-) >0.05
rs8065221 chr17:76327387 SOCS3 [-25477bp] C - 12 A vs. G - - >1 (-) 44 (-) >0.05
rs17642548 chr17:76409809 PGS1 C - 12 A vs. G 0.317 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs2292641 chr17:76395634 PGS1 C - 12 T vs. C 0.142 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs12937653 chr17:76335084 SOCS3 [-17780bp] C - 12 T vs. C 0.083 (C) - >1 (-) 0 (-) >0.05
rs11077368 chr17:76448088 DNAH17 C - 11 T vs. C 0.042 (T) 0.05 (T) >1 (-) 4 (-) >0.05
rs8064478 chr17:76466500 DNAH17 C - 13 A vs. G - - <1 (-) 36 (-) >0.05
rs11656568 chr17:76378869 PGS1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs8073753 chr17:76385310 PGS1 C - 12 T vs. C 0.1 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs7221341 chr17:76331471 SOCS3 [-21393bp] C - 12 T vs. C 0.358 (T) 0.0 (T) <1 (-) 47 (-) >0.05
rs4082919 chr17:76377482 PGS1 C - 13 T vs. G 0.458 (G) 0.5 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]