PGS1, chr17:76374721-76421195 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4969188 chr17:76422473 DNAH17 All: C 108,990 15 T vs. C 0.258 (T) 0.042 (T) 0.92 (0.88-0.96) 0 (0-33) 5.75e-05
Meta_image?name=rs4969188

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8071552 chr17:76381416 PGS1 C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs74395281 chr17:76347076 SOCS3 [-5788bp] C - 12 C vs. G - - >1 (-) 25 (-) >0.05
rs12453598 chr17:76389164 PGS1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs55688659 chr17:76357977 SOCS3 [+1819bp] C - 12 A vs. G 0.133 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs8070023 chr17:76372679 PGS1 [-2042bp] C - 12 A vs. C - - <1 (-) 3 (-) >0.05
rs75345763 chr17:76469283 DNAH17 C - 13 A vs. G 0.067 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs938351 chr17:76399404 PGS1 C - 13 T vs. C 0.367 (C) 0.492 (T) <1 (-) 0 (-) >0.05
rs7220865 chr17:76377673 PGS1 C - 12 T vs. C 0.092 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs9302875 chr17:76440307 DNAH17 C - 9 T vs. C - 0.092 (T) <1 (-) 0 (-) >0.05
rs641989 chr17:76468354 DNAH17 C - 11 A vs. G - - <1 (-) 23 (-) >0.05
rs61303741 chr17:76406957 PGS1 C - 12 T vs. C 0.083 (C) 0.017 (C) <1 (-) 0 (-) >0.05
rs11653383 chr17:76387103 PGS1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4630616 chr17:76330484 SOCS3 [-22380bp] C - 12 A vs. G 0.158 (A) - <1 (-) 0 (-) >0.05
rs7405756 chr17:76471069 DNAH17 C - 13 C vs. G 0.158 (C) 0.25 (C) <1 (-) 6 (-) >0.05
rs4447485 chr17:76338687 SOCS3 [-14177bp] C - 12 T vs. C 0.183 (T) 0.108 (T) <1 (-) 26 (-) >0.05
rs12452576 chr17:76386037 PGS1 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs11657865 chr17:76387274 PGS1 C - 13 A vs. C - 0.425 (C) >1 (-) 0 (-) >0.05
rs62079131 chr17:76328169 SOCS3 [-24695bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs4969179 chr17:76391454 PGS1 C - 13 T vs. G 0.367 (T) 0.458 (T) >1 (-) 0 (-) >0.05
rs8077859 chr17:76386335 PGS1 C - 13 T vs. C 0.367 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs11653305 chr17:76386918 PGS1 C - 13 T vs. C 0.367 (T) 0.458 (T) >1 (-) 0 (-) >0.05
rs4527079 chr17:76368761 PGS1 [-5960bp] C - 12 A vs. G 0.133 (A) 0.292 (A) <1 (-) 5 (-) >0.05
rs62079132 chr17:76328860 SOCS3 [-24004bp] C - 12 T vs. C 0.175 (C) 0.142 (C) >1 (-) 0 (-) >0.05
rs4969178 chr17:76388202 PGS1 C - 13 A vs. G 0.375 (A) 0.425 (G) >1 (-) 0 (-) >0.05
rs56027941 chr17:76458855 DNAH17 C - 11 C vs. G 0.042 (C) 0.1 (C) >1 (-) 0 (-) >0.05
rs56205534 chr17:76376525 PGS1 C - 12 T vs. C 0.092 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs4969169 chr17:76353910 SOCS3 C - 12 T vs. C 0.117 (T) 0.292 (T) <1 (-) 0 (-) >0.05
rs59362812 chr17:76381318 PGS1 C - 12 A vs. G 0.067 (G) - <1 (-) 0 (-) >0.05
rs62079158 chr17:76381122 PGS1 C - 12 T vs. C 0.092 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs6501199 chr17:76334786 SOCS3 [-18078bp] C - 12 C vs. G 0.333 (G) 0.3 (G) >1 (-) 49 (-) >0.05
rs143046666 chr17:76400174 PGS1 C - 7 A vs. C - - >1 (-) 0 (-) >0.05
rs148455938 chr17:76359717 SOCS3 [+3559bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs4994934 chr17:76364677 SOCS3 [+8519bp] C - 12 T vs. C 0.142 (T) 0.25 (T) <1 (-) 1 (-) >0.05
rs62079155 chr17:76374978 PGS1 C - 12 C vs. G 0.092 (G) 0.058 (G) <1 (-) 0 (-) >0.05
rs117883742 chr17:76404526 PGS1 C - 7 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs632058 chr17:76437786 DNAH17 C - 12 A vs. G 0.375 (A) 0.158 (G) <1 (-) 0 (-) >0.05
rs2289750 chr17:76437343 DNAH17 C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs73380179 chr17:76350692 SOCS3 [-2172bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs7211232 chr17:76442641 DNAH17 C - 13 T vs. C 0.075 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs4444401 chr17:76324751 SOCS3 [-28113bp] C - 12 A vs. G 0.433 (G) 0.275 (A) <1 (-) 61 (-) >0.05
rs9896278 chr17:76373087 PGS1 [-1634bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs7222668 chr17:76435774 DNAH17 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs112400356 chr17:76327523 SOCS3 [-25341bp] C - 12 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs58888596 chr17:76342914 SOCS3 [-9950bp] C - 10 A vs. G 0.025 (A) 0.083 (A) <1 (-) 44 (-) >0.05
rs16971055 chr17:76326540 SOCS3 [-26324bp] C - 12 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs7217888 chr17:76430004 DNAH17 C - 13 A vs. G 0.117 (G) - <1 (-) 0 (-) >0.05
rs73380011 chr17:76412030 PGS1 C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs55646506 chr17:76413187 PGS1 C - 13 T vs. C 0.075 (T) - >1 (-) 0 (-) >0.05
rs6501209 chr17:76414300 PGS1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs685099 chr17:76460937 DNAH17 C - 12 T vs. C 0.225 (C) 0.142 (C) >1 (-) 14 (-) >0.05

Association studies for this region [+]