PKNOX1, chr21:44394620-44453691 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34637056 chr21:44355115 MIR5692B [-15923bp] All: C 108,990 15 C vs. T 0.442 (C) 0.117 (C) 1.10 (1.06-1.14) 45 (0-70) 3.54e-07
Meta_image?name=rs34637056

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71320579 chr21:44372921 MIR5692B [+1797bp] C - 12 A vs. G 0.058 (A) - >1 (-) 34 (-) >0.05
rs35307078 chr21:44475876 CBS C - 13 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs2244171 chr21:44496594 CBS C - 13 T vs. G - - <1 (-) 53 (-) >0.05
rs2839631 chr21:44470086 CBS [-3215bp] C - 13 T vs. C 0.342 (C) 0.425 (T) >1 (-) 0 (-) >0.05
rs6586283 chr21:44478680 CBS C - 13 T vs. C 0.192 (C) - <1 (-) 27 (-) >0.05
rs71320582 chr21:44373642 MIR5692B [+2518bp] C - 12 A vs. G 0.042 (A) - >1 (-) 33 (-) >0.05
rs9977247 chr21:44373647 MIR5692B [+2523bp] C - 12 T vs. C 0.042 (T) - >1 (-) 33 (-) >0.05
rs9978833 chr21:44373680 MIR5692B [+2556bp] C - 12 A vs. G 0.042 (A) - >1 (-) 33 (-) >0.05
rs9979930 chr21:44373728 MIR5692B [+2604bp] C - 13 A vs. C 0.058 (C) - <1 (-) 28 (-) >0.05
rs114411261 chr21:44370650 MIR5692B [-388bp] C - 4 T vs. G - - >1 (-) 0 (-) >0.05
rs400660 chr21:44464712 CBS [-8589bp] C - 13 T vs. C 0.108 (T) 0.267 (T) <1 (-) 0 (-) >0.05
rs76434486 chr21:44487601 CBS C - 13 T vs. C 0.108 (T) - >1 (-) 0 (-) >0.05
rs34826800 chr21:44355947 MIR5692B [-15091bp] C - 13 A vs. G - - <1 (-) 6 (-) >0.05
rs2298760 chr21:44486211 CBS C - 13 T vs. C 0.108 (T) - >1 (-) 0 (-) >0.05
rs1788464 chr21:44470491 CBS [-2810bp] C - 13 A vs. G 0.208 (G) 0.158 (G) <1 (-) 0 (-) >0.05
rs73906418 chr21:44480978 CBS C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs143839056 chr21:44439005 PKNOX1 C - 13 C vs. G - - >1 (-) 19 (-) >0.05
rs143135520 chr21:44462324 PKNOX1 [+8633bp] C - 8 T vs. G - - <1 (-) 0 (-) >0.05
rs6586282 chr21:44478497 CBS C - 13 T vs. C 0.192 (T) - >1 (-) 30 (-) >0.05
rs234691 chr21:44431548 PKNOX1 C - 13 T vs. C 0.083 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs28809592 chr21:44374462 MIR5692B [+3338bp] C - 12 T vs. C 0.075 (C) - <1 (-) 33 (-) >0.05
rs719038 chr21:44470944 CBS [-2357bp] C - 13 A vs. G 0.342 (G) 0.425 (A) >1 (-) 0 (-) >0.05
rs139343511 chr21:44393067 PKNOX1 [-1553bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs234758 chr21:44418920 PKNOX1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs115382496 chr21:44366618 MIR5692B [-4420bp] C - 13 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs1672138 chr21:44394966 PKNOX1 C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs234729 chr21:44449095 PKNOX1 C - 13 A vs. G 0.083 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs7278195 chr21:44471849 CBS [-1452bp] C - 13 T vs. G 0.333 (T) - <1 (-) 0 (-) >0.05
rs151237735 chr21:44459210 PKNOX1 [+5519bp] C - 9 A vs. C - - >1 (-) 0 (-) >0.05
rs397589 chr21:44490214 CBS C - 13 T vs. G 0.483 (G) 0.133 (T) >1 (-) 0 (-) >0.05
rs1005584 chr21:44477095 CBS C - 11 T vs. C - 0.067 (T) <1 (-) 0 (-) >0.05
rs1005585 chr21:44477033 CBS C - 11 T vs. C 0.017 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs34707163 chr21:44373587 MIR5692B [+2463bp] C - 12 T vs. G 0.05 (T) - >1 (-) 30 (-) >0.05
rs112965298 chr21:44370627 MIR5692B [-411bp] C - 4 T vs. G - - <1 (-) 48 (-) >0.05
rs201855696 chr21:44374524 MIR5692B [+3400bp] C - 6 C vs. G - - >1 (-) 0 (-) >0.05
rs408699 chr21:44385478 PKNOX1 [-9142bp] C - 13 A vs. G 0.15 (G) 0.258 (G) <1 (-) 0 (-) >0.05
rs408701 chr21:44385483 PKNOX1 [-9137bp] C - 13 A vs. G 0.158 (G) 0.258 (G) <1 (-) 0 (-) >0.05
rs57063354 chr21:44472345 CBS [-956bp] C - 12 A vs. G 0.033 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs234780 chr21:44429859 PKNOX1 C - 13 A vs. G 0.083 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs8133239 chr21:44469704 CBS [-3597bp] C - 12 T vs. C 0.033 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs73372367 chr21:44479808 CBS C - 11 T vs. C 0.025 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs3788050 chr21:44474663 CBS C - 11 T vs. G - 0.083 (T) <1 (-) 0 (-) >0.05
rs234771 chr21:44424155 PKNOX1 C - 13 T vs. C - - >1 (-) 2 (-) >0.05
rs760124 chr21:44475953 CBS C - 13 T vs. C 0.042 (C) 0.033 (C) >1 (-) 25 (-) >0.05
rs144981423 chr21:44393699 PKNOX1 [-921bp] C - 9 T vs. G - - >1 (-) 0 (-) >0.05
rs234782 chr21:44502524 CBS [+5471bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs13046827 chr21:44472719 CBS [-582bp] C - 13 A vs. G 0.325 (A) - <1 (-) 0 (-) >0.05
rs35052117 chr21:44478540 CBS C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs9976191 chr21:44358783 MIR5692B [-12255bp] C - 13 A vs. G 0.208 (G) 0.258 (G) <1 (-) 34 (-) >0.05
rs9753853 chr21:44355518 MIR5692B [-15520bp] C - 13 T vs. C 0.233 (T) 0.175 (T) <1 (-) 0 (-) >0.05

Association studies for this region [+]