PKNOX1, chr21:44394620-44453691 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34637056 chr21:44355115 MIR5692B [-15923bp] All: C 108,990 15 C vs. T 0.442 (C) 0.117 (C) 1.10 (1.06-1.14) 45 (0-70) 3.54e-07
Meta_image?name=rs34637056

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113127396 chr21:44346060 NDUFV3 [+12646bp] C - 13 T vs. G 0.075 (T) - >1 (-) 23 (-) <0.05
rs138673287 chr21:44500991 CBS [+3938bp] C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs1789946 chr21:44456890 PKNOX1 [+3199bp] C - 13 A vs. G 0.292 (G) 0.092 (G) <1 (-) 0 (-) <0.05
rs409902 chr21:44459264 PKNOX1 [+5573bp] C - 13 T vs. C 0.275 (C) 0.092 (C) <1 (-) 0 (-) <0.05
rs73372399 chr21:44502816 CBS [+5763bp] C - 12 A vs. G 0.017 (G) 0.108 (G) >1 (-) 0 (-) <0.05
rs2401141 chr21:44369003 MIR5692B [-2035bp] C - 13 T vs. G 0.342 (T) 0.4 (G) <1 (-) 0 (-) <0.05
rs428979 chr21:44411620 PKNOX1 C - 13 A vs. C 0.383 (C) 0.2 (C) <1 (-) 0 (-) <0.05
rs2401142 chr21:44369011 MIR5692B [-2027bp] C - 13 T vs. C 0.342 (T) 0.4 (C) <1 (-) 0 (-) <0.05
rs1672131 chr21:44455875 PKNOX1 [+2184bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs447896 chr21:44410068 PKNOX1 C - 13 A vs. G 0.392 (A) 0.133 (A) >1 (-) 0 (-) <0.05
rs234694 chr21:44433969 PKNOX1 C - 13 A vs. C 0.383 (A) 0.2 (A) >1 (-) 0 (-) <0.05
rs234752 chr21:44415642 PKNOX1 C - 13 A vs. G 0.383 (A) 0.2 (A) >1 (-) 0 (-) <0.05
rs1788479 chr21:44434836 PKNOX1 C - 13 A vs. C 0.342 (A) 0.092 (A) >1 (-) 1 (-) <0.05
rs2156425 chr21:44369452 MIR5692B [-1586bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs234763 chr21:44421937 PKNOX1 C - 13 A vs. G 0.375 (A) 0.192 (A) >1 (-) 0 (-) <0.05
rs1788469 chr21:44397841 PKNOX1 C - 13 T vs. C 0.333 (C) 0.2 (C) <1 (-) 0 (-) <0.05
rs234712 chr21:44487453 CBS C - 12 A vs. G 0.05 (A) 0.142 (A) <1 (-) 0 (-) <0.05
rs234769 chr21:44423662 PKNOX1 C - 13 T vs. C 0.383 (T) 0.2 (T) >1 (-) 0 (-) <0.05
rs234698 chr21:44380325 MIR5692B [+9201bp] C - 13 T vs. G - - <1 (-) 0 (-) <0.05
rs413330 chr21:44398358 PKNOX1 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs439944 chr21:44466112 CBS [-7189bp] C - 13 A vs. G 0.275 (G) 0.083 (G) <1 (-) 0 (-) <0.05
rs76712678 chr21:44356228 MIR5692B [-14810bp] C - 13 T vs. C 0.075 (C) - <1 (-) 29 (-) <0.05
rs71322506 chr21:44491293 CBS C - 11 T vs. C 0.058 (C) - <1 (-) 0 (-) <0.05
rs4346473 chr21:44356550 MIR5692B [-14488bp] C - 13 T vs. C 0.075 (C) - <1 (-) 29 (-) <0.05
rs9977562 chr21:44389350 PKNOX1 [-5270bp] C - 13 A vs. G 0.35 (G) 0.192 (G) <1 (-) 0 (-) <0.05
rs374349 chr21:44373545 MIR5692B [+2421bp] C - 13 T vs. G - - <1 (-) 0 (-) <0.05
rs234701 chr21:44476759 CBS C - 13 A vs. G 0.033 (A) 0.117 (A) <1 (-) 0 (-) <0.05
rs141660494 chr21:44413967 PKNOX1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs1672130 chr21:44455924 PKNOX1 [+2233bp] C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs1788482 chr21:44455916 PKNOX1 [+2225bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs422791 chr21:44461782 PKNOX1 [+8091bp] C - 13 T vs. C 0.275 (C) 0.092 (C) <1 (-) 0 (-) <0.05
rs77233863 chr21:44358518 MIR5692B [-12520bp] C - 13 A vs. C 0.067 (A) - >1 (-) 28 (-) <0.05
rs149094846 chr21:44406552 PKNOX1 C - 11 A vs. G - - >1 (-) 4 (-) <0.05
rs234745 chr21:44455110 PKNOX1 [+1419bp] C - 13 A vs. G 0.275 (A) 0.092 (A) >1 (-) 0 (-) <0.05
rs11700992 chr21:44477441 CBS C - 13 A vs. G 0.175 (A) - >1 (-) 0 (-) <0.05
rs2401146 chr21:44387010 PKNOX1 [-7610bp] C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs375766 chr21:44458967 PKNOX1 [+5276bp] C - 13 A vs. G 0.275 (A) 0.092 (A) >1 (-) 0 (-) <0.05
rs1672132 chr21:44455644 PKNOX1 [+1953bp] C - 13 A vs. G 0.275 (A) 0.108 (A) >1 (-) 0 (-) <0.05
rs35568502 chr21:44463724 CBS [-9577bp] C - 13 T vs. C 0.292 (C) 0.092 (C) <1 (-) 0 (-) <0.05
rs234702 chr21:44477543 CBS C - 13 C vs. G 0.067 (G) 0.192 (G) >1 (-) 10 (-) <0.05
rs1789952 chr21:44465533 CBS [-7768bp] C - 13 T vs. C 0.275 (C) 0.058 (C) <1 (-) 0 (-) <0.05
rs1672122 chr21:44465534 CBS [-7767bp] C - 13 A vs. G 0.275 (A) 0.092 (A) >1 (-) 0 (-) <0.05
rs75965053 chr21:44383072 PKNOX1 [-11548bp] C - 13 T vs. C 0.3 (T) - >1 (-) 0 (-) <0.05
rs62219528 chr21:44455711 PKNOX1 [+2020bp] C - 13 A vs. G 0.275 (A) 0.092 (A) >1 (-) 0 (-) <0.05
rs234699 chr21:44383280 PKNOX1 [-11340bp] C - 13 T vs. C 0.417 (T) 0.192 (T) >1 (-) 0 (-) <0.05
rs1672126 chr21:44463742 CBS [-9559bp] C - 13 A vs. G 0.283 (A) 0.092 (A) >1 (-) 0 (-) <0.05
rs56234846 chr21:44456441 PKNOX1 [+2750bp] C - 13 T vs. C 0.275 (T) 0.1 (T) >1 (-) 0 (-) <0.05
rs2839616 chr21:44425399 PKNOX1 C - 13 T vs. C 0.417 (C) 0.3 (C) <1 (-) 26 (-) <0.05
rs234721 chr21:44446455 PKNOX1 C - 13 A vs. T 0.275 (A) - >1 (-) 0 (-) <0.05
rs28506838 chr21:44408453 PKNOX1 C - 13 C vs. G 0.45 (C) 0.267 (C) >1 (-) 23 (-) <0.05

Association studies for this region [+]