PLCD3, chr17:43186335-43210721 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1053578 chr17:43221285 ACBD4 All: C 108,990 15 C vs. T 0.042 (C) - 0.81 (0.75-0.89) 0 (0-47) 1.90e-06
Meta_image?name=rs1053578

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1053578 chr17:43221285 ACBD4 All: C 108,990 15 C vs. T 0.042 (C) - 0.81 (0.75-0.89) 0 (0-47) 1.90e-06
rs77403959 chr17:43208068 PLCD3 All: C 108,990 15 T vs. C 0.042 (T) - 0.82 (0.75-0.89) 0 (0-43) 2.92e-06
rs74927046 chr17:43257356 HEXIM2 [+9949bp] C - 12 T vs. G - - <1 (-) 0 (-) <0.05
rs28588212 chr17:43212473 ACBD4 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs7217491 chr17:43248447 HEXIM2 [+1040bp] C - 13 T vs. C - 0.308 (C) <1 (-) 0 (-) <0.05
rs75589269 chr17:43255381 HEXIM2 [+7974bp] C - 13 T vs. C - 0.275 (T) >1 (-) 0 (-) <0.05
rs4792868 chr17:43254040 HEXIM2 [+6633bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs75863857 chr17:43241827 HEXIM2 C - 13 A vs. T - - <1 (-) 0 (-) <0.05
rs16939893 chr17:43240081 HEXIM2 C - 13 T vs. C - 0.283 (T) >1 (-) 0 (-) <0.05
rs59622946 chr17:43237648 HEXIM2 [-419bp] C - 13 T vs. G - 0.275 (T) >1 (-) 0 (-) <0.05
rs73319048 chr17:43245402 HEXIM2 C - 13 C vs. G - 0.242 (G) <1 (-) 0 (-) <0.05
rs3744412 chr17:43225422 HEXIM1 C - 13 C vs. G - 0.275 (C) >1 (-) 0 (-) <0.05
rs116523982 chr17:43223170 HEXIM1 [-1514bp] C - 13 A vs. G - 0.283 (A) >1 (-) 0 (-) <0.05
rs4986173 chr17:43222528 ACBD4 [+980bp] C - 13 T vs. C - 0.275 (C) <1 (-) 0 (-) <0.05
rs79716442 chr17:43220386 ACBD4 C - 13 T vs. C - 0.283 (T) >1 (-) 0 (-) <0.05
rs77266462 chr17:43217584 ACBD4 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs59189862 chr17:43189567 PLCD3 C - 13 T vs. C - 0.225 (T) >1 (-) 0 (-) <0.05
rs3744757 chr17:43189815 PLCD3 C - 13 A vs. G - 0.242 (A) >1 (-) 0 (-) <0.05
rs149455674 chr17:43149772 NMT1 C - 11 T vs. C - - <1 (-) 20 (-) <0.05
rs3744758 chr17:43195663 PLCD3 C - 13 A vs. G - 0.25 (G) <1 (-) 0 (-) <0.05
rs3744759 chr17:43195699 PLCD3 C - 13 A vs. G - 0.25 (A) >1 (-) 0 (-) <0.05
rs57837152 chr17:43172906 NMT1 C - 13 A vs. G - 0.25 (G) <1 (-) 0 (-) <0.05
rs16939810 chr17:43167952 NMT1 C - 13 T vs. C - 0.242 (T) >1 (-) 0 (-) <0.05
rs78420531 chr17:43249246 HEXIM2 [+1839bp] C - 12 T vs. G 0.05 (T) 0.108 (T) >1 (-) 0 (-) <0.05
rs146513902 chr17:43166387 NMT1 C - 10 T vs. C - - >1 (-) 0 (-) <0.05
rs74398190 chr17:43233387 HEXIM1 [+3919bp] C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs78867706 chr17:43185895 NMT1 C - 10 T vs. C - 0.05 (T) >1 (-) 0 (-) <0.05
rs151044812 chr17:43234754 HEXIM2 [-3313bp] C - 9 T vs. C - - >1 (-) 0 (-) <0.05
rs142515394 chr17:43203689 PLCD3 C - 8 A vs. T - - <1 (-) 0 (-) <0.05
rs116861786 chr17:43182002 NMT1 C - 13 A vs. G 0.008 (A) - >1 (-) 32 (-) <0.05
rs117767494 chr17:43144183 NMT1 C - 7 T vs. C 0.008 (T) - >1 (-) 42 (-) <0.05
rs4627401 chr17:43244034 HEXIM2 C - 13 A vs. T 0.475 (A) 0.292 (A) <1 (-) 7 (-) <0.05
rs72628318 chr17:43219912 ACBD4 C - 13 A vs. G 0.075 (G) 0.275 (G) <1 (-) 0 (-) <0.05
rs62066674 chr17:43207426 PLCD3 C - 13 T vs. G 0.083 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs3744760 chr17:43195981 PLCD3 C - 12 T vs. C 0.233 (C) 0.467 (T) <1 (-) 0 (-) >0.05
rs145029779 chr17:43177604 NMT1 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs2306828 chr17:43213772 ACBD4 C - 13 A vs. C 0.167 (A) 0.1 (A) <1 (-) 21 (-) >0.05
rs146633312 chr17:43186032 NMT1 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs66532542 chr17:43207030 PLCD3 C - 13 T vs. C 0.083 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs2864881 chr17:43191099 PLCD3 C - 13 T vs. C 0.4 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs8073097 chr17:43173516 NMT1 C - 13 A vs. G 0.017 (G) 0.05 (G) <1 (-) 11 (-) >0.05
rs148290969 chr17:43168525 NMT1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs117232481 chr17:43205625 PLCD3 C - 11 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs77307957 chr17:43155247 NMT1 C - 11 A vs. G 0.017 (G) - <1 (-) 42 (-) >0.05
rs7405669 chr17:43250933 HEXIM2 [+3526bp] C - 13 A vs. G - - <1 (-) 14 (-) >0.05
rs9906112 chr17:43203469 PLCD3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs7217321 chr17:43197085 PLCD3 C - 13 A vs. G 0.183 (A) 0.092 (A) <1 (-) 34 (-) >0.05
rs77755021 chr17:43145980 NMT1 C - 11 T vs. G - 0.117 (G) <1 (-) 0 (-) >0.05
rs734921 chr17:43190846 PLCD3 C - 13 A vs. G 0.025 (A) - <1 (-) 48 (-) >0.05
rs7209028 chr17:43199100 PLCD3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]