PLCD3, chr17:43186335-43210721 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1053578 chr17:43221285 ACBD4 All: C 108,990 15 C vs. T 0.042 (C) - 0.81 (0.75-0.89) 0 (0-47) 1.90e-06
Meta_image?name=rs1053578

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs59542675 chr17:43253143 HEXIM2 [+5736bp] C - 13 A vs. G 0.058 (A) - <1 (-) 46 (-) >0.05
rs145682304 chr17:43220296 ACBD4 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs147551457 chr17:43177720 NMT1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1052169 chr17:43189049 PLCD3 C - 13 A vs. C 0.242 (C) 0.092 (C) <1 (-) 0 (-) >0.05
rs2239920 chr17:43170422 NMT1 C - 13 A vs. G 0.433 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs28570440 chr17:43167157 NMT1 C - 13 T vs. C 0.433 (T) 0.108 (T) <1 (-) 0 (-) >0.05
rs7214267 chr17:43157709 NMT1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12936466 chr17:43231991 HEXIM1 [+2523bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs2301597 chr17:43173273 NMT1 C - 13 T vs. C 0.425 (T) 0.167 (C) >1 (-) 0 (-) >0.05
rs1005136 chr17:43164246 NMT1 C - 13 T vs. G 0.433 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs8074938 chr17:43153006 NMT1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2239918 chr17:43169109 NMT1 C - 13 A vs. T 0.433 (A) 0.142 (A) <1 (-) 0 (-) >0.05
rs2239925 chr17:43185820 NMT1 C - 13 T vs. C 0.442 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs6503420 chr17:43152719 NMT1 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs9709123 chr17:43244620 HEXIM2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs17684944 chr17:43187141 PLCD3 C - 13 T vs. C 0.442 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs16939884 chr17:43216815 ACBD4 C - 13 T vs. G 0.05 (T) - <1 (-) 44 (-) >0.05
rs71373536 chr17:43221808 ACBD4 [+260bp] C - 13 A vs. G 0.217 (A) - >1 (-) 0 (-) >0.05
rs16939879 chr17:43216472 ACBD4 C - 13 A vs. G 0.05 (G) - >1 (-) 44 (-) >0.05
rs150674338 chr17:43229500 HEXIM1 [+32bp] C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs34497316 chr17:43187787 PLCD3 C - 13 A vs. G 0.142 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs1542688 chr17:43215632 ACBD4 C - 13 T vs. C 0.05 (T) - <1 (-) 44 (-) >0.05
rs12603813 chr17:43196584 PLCD3 C - 13 T vs. C 0.233 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs916661 chr17:43158902 NMT1 C - 13 A vs. G 0.217 (A) 0.025 (A) <1 (-) 9 (-) >0.05
rs144338439 chr17:43181025 NMT1 C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs11871043 chr17:43172849 NMT1 C - 13 T vs. C 0.45 (T) 0.258 (C) >1 (-) 0 (-) >0.05
rs2285427 chr17:43191006 PLCD3 C - 13 T vs. C 0.075 (C) 0.258 (C) <1 (-) 20 (-) >0.05
rs145144588 chr17:43147767 NMT1 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs2239917 chr17:43165887 NMT1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs139863956 chr17:43229559 HEXIM1 [+91bp] C - 7 C vs. G - - <1 (-) 2 (-) >0.05
rs113215819 chr17:43242215 HEXIM2 C - 3 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs7226273 chr17:43197675 PLCD3 C - 13 T vs. C 0.05 (C) - >1 (-) 36 (-) >0.05
rs1468120 chr17:43175162 NMT1 C - 13 A vs. G 0.433 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs4528619 chr17:43157656 NMT1 C - 13 C vs. G - - <1 (-) 10 (-) >0.05
rs9899380 chr17:43173131 NMT1 C - 13 C vs. G 0.417 (C) 0.242 (G) >1 (-) 0 (-) >0.05
rs146345914 chr17:43173639 NMT1 C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs2239916 chr17:43165185 NMT1 C - 13 T vs. C 0.442 (T) 0.258 (C) >1 (-) 0 (-) >0.05
rs7502890 chr17:43152675 NMT1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs6503422 chr17:43163851 NMT1 C - 13 T vs. C 0.425 (T) 0.267 (C) >1 (-) 0 (-) >0.05
rs2157840 chr17:43151473 NMT1 C - 13 T vs. G 0.45 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs2027995 chr17:43161353 NMT1 C - 13 T vs. C 0.358 (C) 0.467 (C) <1 (-) 0 (-) >0.05
rs2157839 chr17:43151400 NMT1 C - 13 T vs. C 0.358 (T) 0.475 (T) >1 (-) 0 (-) >0.05
rs1053733 chr17:43183028 NMT1 C - 13 A vs. G 0.425 (A) 0.258 (G) >1 (-) 0 (-) >0.05
rs8064386 chr17:43236109 HEXIM2 [-1958bp] C - 13 T vs. C 0.467 (C) 0.45 (T) <1 (-) 0 (-) >0.05
rs77288888 chr17:43143662 NMT1 C - 13 A vs. G - - >1 (-) 41 (-) >0.05
rs143348354 chr17:43163355 NMT1 C - 13 A vs. T - - <1 (-) 22 (-) >0.05
rs146877724 chr17:43230534 HEXIM1 [+1066bp] C - 9 T vs. G - - <1 (-) 42 (-) >0.05
rs12051846 chr17:43226887 HEXIM1 C - 13 A vs. G 0.242 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs139981906 chr17:43252998 HEXIM2 [+5591bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs4986167 chr17:43202492 PLCD3 All: C 108,990 15 G vs. A - - 0.99 (0.95-1.02) 27 (0-61) 0.409

Association studies for this region [+]