PLCD3, chr17:43186335-43210721 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1053578 chr17:43221285 ACBD4 All: C 108,990 15 C vs. T 0.042 (C) - 0.81 (0.75-0.89) 0 (0-47) 1.90e-06
Meta_image?name=rs1053578

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28894784 chr17:43256450 HEXIM2 [+9043bp] C - 13 C vs. G - - >1 (-) 21 (-) >0.05
rs78590647 chr17:43249512 HEXIM2 [+2105bp] C - 12 C vs. G 0.05 (C) - >1 (-) 0 (-) >0.05
rs11867300 chr17:43254152 HEXIM2 [+6745bp] C - 13 A vs. G 0.133 (A) 0.058 (A) >1 (-) 38 (-) >0.05
rs76679230 chr17:43253551 HEXIM2 [+6144bp] C - 13 A vs. G 0.133 (A) 0.058 (A) >1 (-) 37 (-) >0.05
rs1056619 chr17:43209727 PLCD3 C - 13 T vs. C - - <1 (-) 3 (-) >0.05
rs150017271 chr17:43162083 NMT1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs6503419 chr17:43149988 NMT1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs72832859 chr17:43188891 PLCD3 C - 13 C vs. G 0.15 (G) - >1 (-) 10 (-) >0.05
rs1044977 chr17:43227214 HEXIM1 C - 13 T vs. C 0.225 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs4793167 chr17:43181287 NMT1 C - 13 A vs. G 0.042 (A) 0.0 (A) <1 (-) 0 (-) >0.05
rs117156303 chr17:43186579 PLCD3 C - 12 T vs. C - 0.05 (T) >1 (-) 41 (-) >0.05
rs11653145 chr17:43199763 PLCD3 C - 13 T vs. C 0.475 (C) 0.492 (C) <1 (-) 0 (-) >0.05
rs117105863 chr17:43183662 NMT1 C - 12 A vs. G - 0.058 (A) >1 (-) 41 (-) >0.05
rs142720277 chr17:43141314 NMT1 C - 12 A vs. G - - >1 (-) 37 (-) >0.05
rs7208548 chr17:43247930 HEXIM2 [+523bp] C - 13 A vs. C 0.475 (C) 0.308 (A) <1 (-) 8 (-) >0.05
rs118049816 chr17:43156076 NMT1 C - 12 T vs. C - 0.075 (T) >1 (-) 37 (-) >0.05
rs75344682 chr17:43142515 NMT1 C - 4 A vs. G 0.017 (G) - >1 (-) 28 (-) >0.05
rs73319049 chr17:43245614 HEXIM2 C - 13 T vs. C - - >1 (-) 6 (-) >0.05
rs8070221 chr17:43245893 HEXIM2 C - 13 C vs. G 0.475 (C) 0.308 (G) >1 (-) 6 (-) >0.05
rs7212533 chr17:43160763 NMT1 C - 12 C vs. G - 0.083 (G) <1 (-) 38 (-) >0.05
rs7216895 chr17:43160539 NMT1 C - 12 T vs. C - - <1 (-) 38 (-) >0.05
rs148148788 chr17:43160571 NMT1 C - 12 T vs. C - - >1 (-) 38 (-) >0.05
rs74612531 chr17:43179306 NMT1 C - 12 T vs. G - 0.092 (T) >1 (-) 40 (-) >0.05
rs117881906 chr17:43153635 NMT1 C - 12 A vs. G - 0.067 (G) <1 (-) 37 (-) >0.05
rs149168546 chr17:43151610 NMT1 C - 12 T vs. C - - <1 (-) 36 (-) >0.05
rs34361243 chr17:43154258 NMT1 C - 12 T vs. C - 0.067 (C) <1 (-) 37 (-) >0.05
rs145366082 chr17:43178409 NMT1 C - 12 A vs. G - - >1 (-) 40 (-) >0.05
rs138859178 chr17:43152590 NMT1 C - 12 A vs. G - - >1 (-) 36 (-) >0.05
rs7405472 chr17:43222942 ACBD4 [+1394bp] C - 13 C vs. G - - >1 (-) 32 (-) >0.05
rs34727004 chr17:43161320 NMT1 C - 12 T vs. C - 0.083 (C) <1 (-) 38 (-) >0.05
rs117634942 chr17:43175055 NMT1 C - 12 T vs. C - 0.067 (T) >1 (-) 39 (-) >0.05
rs8073025 chr17:43173827 NMT1 C - 12 T vs. C - 0.075 (T) >1 (-) 39 (-) >0.05
rs142013558 chr17:43171834 NMT1 C - 12 C vs. G - - <1 (-) 39 (-) >0.05
rs16939826 chr17:43173218 NMT1 C - 12 A vs. G - 0.067 (A) >1 (-) 39 (-) >0.05
rs148130917 chr17:43172761 NMT1 C - 12 A vs. C - - >1 (-) 39 (-) >0.05
rs145241897 chr17:43162140 NMT1 C - 12 T vs. C - - >1 (-) 38 (-) >0.05
rs8067974 chr17:43232566 HEXIM1 [+3098bp] C - 13 A vs. G 0.283 (G) 0.483 (G) <1 (-) 26 (-) >0.05
rs114451342 chr17:43220608 ACBD4 C - 9 C vs. G - - >1 (-) 0 (-) >0.05
rs2239923 chr17:43176804 NMT1 C - 13 T vs. C 0.317 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs75216325 chr17:43219194 ACBD4 C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs4280297 chr17:43140600 NMT1 C - 13 C vs. G 0.217 (G) - >1 (-) 0 (-) >0.05
rs11653796 chr17:43218259 ACBD4 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7215357 chr17:43157329 NMT1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs28397098 chr17:43146256 NMT1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs79355162 chr17:43201227 PLCD3 C - 12 A vs. G - 0.075 (A) <1 (-) 54 (-) >0.05
rs59695806 chr17:43156023 NMT1 C - 13 T vs. C 0.308 (C) 0.242 (C) <1 (-) 0 (-) >0.05
rs115585516 chr17:43146887 NMT1 C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs6503421 chr17:43156716 NMT1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs138144764 chr17:43187221 PLCD3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs6503412 chr17:43137770 DCAKD C - 13 A vs. G 0.467 (A) 0.233 (G) >1 (-) 20 (-) >0.05

Association studies for this region [+]