PLCD3, chr17:43186335-43210721 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1053578 chr17:43221285 ACBD4 All: C 108,990 15 C vs. T 0.042 (C) - 0.81 (0.75-0.89) 0 (0-47) 1.90e-06
Meta_image?name=rs1053578

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12948326 chr17:43188117 PLCD3 C - 13 T vs. G 0.342 (G) 0.5 (G) <1 (-) 0 (-) >0.05
rs11652187 chr17:43199904 PLCD3 C - 13 A vs. G 0.475 (G) 0.492 (G) <1 (-) 0 (-) >0.05
rs4986172 chr17:43216281 ACBD4 C - 12 T vs. C 0.283 (T) 0.492 (C) >1 (-) 32 (-) >0.05
chr17:43174231 chr17:43174231 NMT1 C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs12944434 chr17:43200294 PLCD3 C - 13 A vs. G 0.475 (G) 0.425 (A) <1 (-) 5 (-) >0.05
rs142092984 chr17:43150048 NMT1 C - 8 C vs. G - - >1 (-) 48 (-) >0.05
rs11079425 chr17:43144288 NMT1 C - 13 A vs. G 0.217 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs9898309 chr17:43220068 ACBD4 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs6503416 chr17:43144195 NMT1 C - 13 T vs. C 0.475 (C) - <1 (-) 23 (-) >0.05
rs4793169 chr17:43152877 NMT1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs1978070 chr17:43144150 NMT1 C - 13 A vs. G 0.217 (G) - >1 (-) 0 (-) >0.05
rs28493834 chr17:43161990 NMT1 C - 13 T vs. C - - <1 (-) 20 (-) >0.05
rs3744761 chr17:43196013 PLCD3 C - 13 T vs. C 0.042 (T) 0.15 (T) >1 (-) 0 (-) >0.05
rs2027994 chr17:43161114 NMT1 C - 13 A vs. G 0.417 (A) 0.275 (G) >1 (-) 0 (-) >0.05
rs58219619 chr17:43207624 PLCD3 C - 13 A vs. G 0.267 (A) - <1 (-) 0 (-) >0.05
rs143936341 chr17:43150217 NMT1 C - 12 A vs. G - - >1 (-) 36 (-) >0.05
rs147533516 chr17:43245398 HEXIM2 C - 12 A vs. G - - <1 (-) 6 (-) >0.05
rs145168596 chr17:43171735 NMT1 C - 12 A vs. G - - <1 (-) 14 (-) >0.05
rs6503413 chr17:43141342 NMT1 C - 13 T vs. C - - <1 (-) 21 (-) >0.05
rs8066395 chr17:43147582 NMT1 C - 13 A vs. G 0.192 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs6503415 chr17:43141634 NMT1 C - 13 T vs. C 0.467 (C) 0.25 (T) <1 (-) 21 (-) >0.05
rs901753 chr17:43228491 HEXIM1 C - 13 T vs. C 0.05 (T) - <1 (-) 46 (-) >0.05
rs713101 chr17:43192821 PLCD3 C - 13 A vs. G - 0.308 (A) <1 (-) 0 (-) >0.05
rs35085579 chr17:43232013 HEXIM1 [+2545bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs144490428 chr17:43233408 HEXIM1 [+3940bp] C - 7 T vs. G - - <1 (-) 0 (-) >0.05
rs12946454 chr17:43208121 PLCD3 C - 13 A vs. T 0.242 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs151255310 chr17:43189700 PLCD3 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
chr17:43196683 chr17:43196683 PLCD3 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs5026009 chr17:43189359 PLCD3 C - 13 T vs. C 0.183 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs2239924 chr17:43182810 NMT1 C - 13 T vs. G 0.05 (G) 0.267 (G) >1 (-) 24 (-) >0.05
rs56360935 chr17:43156135 NMT1 C - 13 A vs. T 0.308 (T) 0.208 (T) <1 (-) 0 (-) >0.05
rs149773134 chr17:43187115 PLCD3 C - 7 A vs. C - - <1 (-) 0 (-) >0.05
rs60289499 chr17:43218677 ACBD4 C - 13 A vs. G 0.225 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs1989802 chr17:43185242 NMT1 C - 13 C vs. G 0.342 (C) 0.35 (G) >1 (-) 0 (-) >0.05
rs61516629 chr17:43192024 PLCD3 C - 12 T vs. G - 0.083 (G) <1 (-) 47 (-) >0.05
chr17:43157771 chr17:43157771 NMT1 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs4792858 chr17:43244700 HEXIM2 C - 13 A vs. C 0.283 (C) 0.292 (C) <1 (-) 0 (-) >0.05
rs12604082 chr17:43201240 PLCD3 C - 13 T vs. C 0.183 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs62065831 chr17:43136335 DCAKD C - 13 A vs. G - - <1 (-) 43 (-) >0.05
rs78825407 chr17:43152309 NMT1 C - 5 T vs. C 0.008 (T) - <1 (-) 4 (-) >0.05
rs137989694 chr17:43219666 ACBD4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs7214439 chr17:43202378 PLCD3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs77981506 chr17:43155947 NMT1 C - 13 T vs. C 0.042 (C) - >1 (-) 0 (-) >0.05
rs146430889 chr17:43163291 NMT1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs16939858 chr17:43183420 NMT1 C - 13 T vs. C 0.217 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs4793170 chr17:43150995 NMT1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs112162280 chr17:43194413 PLCD3 C - 13 T vs. C 0.308 (T) - >1 (-) 0 (-) >0.05
rs72832829 chr17:43155851 NMT1 C - 6 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs146795286 chr17:43147769 NMT1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs12603905 chr17:43204591 PLCD3 C - 13 A vs. T 0.217 (T) 0.058 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]