PSMB8, chr6:32808494-32812480 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115493740 chr6:32838539 PSMB9 [+11177bp] All: C 103,235 14 A vs. G 0.092 (A) - 0.87 (0.82-0.92) 0 (0-41) 8.65e-06
Meta_image?name=rs115493740

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs142119668 chr6:32786258 HLA-DOB [+1433bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs147554909 chr6:32774379 HLA-DOB [-6161bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs3763354 chr6:32786917 HLA-DOB [+2092bp] C - 12 A vs. G 0.25 (G) 0.133 (G) <1 (-) 34 (-) >0.05
rs9276910 chr6:32851075 PSMB9 [+23713bp] C - 12 A vs. T 0.308 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs62398467 chr6:32764535 HLA-DOB [-16005bp] C - 12 T vs. C - - <1 (-) 29 (-) >0.05
rs72854947 chr6:32814368 PSMB9 C - 12 A vs. G 0.025 (A) - >1 (-) 35 (-) >0.05
rs9276900 chr6:32848566 PSMB9 [+21204bp] C - 12 A vs. C 0.308 (C) 0.158 (C) <1 (-) 0 (-) >0.05
rs73414939 chr6:32854199 PSMB9 [+26837bp] C - 12 T vs. C 0.058 (C) 0.167 (C) <1 (-) 0 (-) >0.05
rs35486885 chr6:32763506 HLA-DOB [-17034bp] C - 12 A vs. G 0.025 (G) 0.017 (G) >1 (-) 22 (-) >0.05
rs73410774 chr6:32789739 TAP2 C - 12 C vs. G 0.058 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs59989068 chr6:32814456 PSMB9 C - 10 T vs. C 0.042 (T) 0.017 (T) <1 (-) 7 (-) >0.05
rs60507022 chr6:32809582 PSMB8 C - 12 T vs. G 0.008 (T) - >1 (-) 19 (-) >0.05
rs56232302 chr6:32816972 PSMB9 C - 12 A vs. G 0.042 (A) - >1 (-) 36 (-) >0.05
rs2857151 chr6:32763514 HLA-DOB [-17026bp] C - 11 A vs. G 0.392 (A) 0.25 (A) <1 (-) 23 (-) >0.05
rs36229525 chr6:32820000 PSMB9 C - 6 A vs. C - - <1 (-) 46 (-) >0.05
rs72860334 chr6:32819330 PSMB9 C - 12 A vs. G 0.017 (G) 0.008 (G) <1 (-) 23 (-) >0.05
rs34710970 chr6:32768115 HLA-DOB [-12425bp] C - 12 A vs. G 0.05 (G) - >1 (-) 22 (-) >0.05
rs56016827 chr6:32818453 PSMB9 C - 12 A vs. G 0.017 (A) - >1 (-) 21 (-) >0.05
rs16871037 chr6:32819225 PSMB9 C - 12 C vs. G - - <1 (-) 20 (-) >0.05
rs9276912 chr6:32851463 PSMB9 [+24101bp] C - 12 A vs. G 0.308 (A) 0.267 (A) >1 (-) 0 (-) >0.05
rs78456409 chr6:32862398 PSMB9 [+35036bp] C - 12 C vs. G - - <1 (-) 34 (-) >0.05
rs6457690 chr6:32855717 PSMB9 [+28355bp] C - 12 A vs. G 0.075 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs9276898 chr6:32848133 PSMB9 [+20771bp] C - 12 T vs. C 0.308 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs12660559 chr6:32758774 HLA-DOB [-21766bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs11965854 chr6:32779164 HLA-DOB [-1376bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs115429670 chr6:32826338 PSMB9 C - 9 T vs. C 0.008 (C) - <1 (-) 62 (-) >0.05
rs28986423 chr6:32758843 HLA-DOB [-21697bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs2097292 chr6:32779803 HLA-DOB [-737bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs4526239 chr6:32777430 HLA-DOB [-3110bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs55781756 chr6:32795706 TAP2 C - 12 A vs. G 0.067 (A) 0.067 (A) >1 (-) 56 (-) >0.05
rs2157081 chr6:32761776 HLA-DOB [-18764bp] C - 12 A vs. G 0.392 (G) 0.25 (G) >1 (-) 8 (-) >0.05
rs8842 chr6:32813161 PSMB9 C - 12 C vs. G - - >1 (-) 2 (-) >0.05
rs114595701 chr6:32807490 TAP2 [+933bp] C - 12 T vs. C 0.075 (T) - <1 (-) 11 (-) >0.05
rs11967649 chr6:32777849 HLA-DOB [-2691bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
chr6:32800961 chr6:32800961 TAP2 C - 8 A vs. T - - <1 (-) 0 (-) >0.05
rs7743252 chr6:32843721 PSMB9 [+16359bp] C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs71565350 chr6:32828175 PSMB9 [+813bp] C - 10 A vs. C - - <1 (-) 0 (-) >0.05
rs9276817 chr6:32828156 PSMB9 [+794bp] C - 12 T vs. C 0.308 (T) 0.15 (T) >1 (-) 0 (-) >0.05
rs17220241 chr6:32822244 PSMB9 C - 12 T vs. G 0.017 (T) - >1 (-) 20 (-) >0.05
rs116698931 chr6:32854706 PSMB9 [+27344bp] C - 12 T vs. G 0.025 (T) 0.025 (T) >1 (-) 34 (-) >0.05
rs7761882 chr6:32859137 PSMB9 [+31775bp] C - 12 A vs. G 0.025 (A) - >1 (-) 39 (-) >0.05
rs2105843 chr6:32779973 HLA-DOB [-567bp] C - 12 A vs. T - - >1 (-) 0 (-) >0.05
rs2857126 chr6:32777140 HLA-DOB [-3400bp] C - 11 T vs. C 0.392 (C) 0.25 (C) >1 (-) 23 (-) >0.05
rs147640113 chr6:32815066 PSMB9 C - 4 T vs. C - - <1 (-) 15 (-) >0.05
rs60066220 chr6:32789280 TAP2 [-330bp] C - 11 A vs. C - - <1 (-) 21 (-) >0.05
rs140949164 chr6:32839311 PSMB9 [+11949bp] C - 9 A vs. C - - <1 (-) 62 (-) >0.05
rs73737377 chr6:32778361 HLA-DOB [-2179bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9276899 chr6:32848168 PSMB9 [+20806bp] C - 12 T vs. C 0.308 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs73737294 chr6:32776898 HLA-DOB [-3642bp] C - 12 A vs. G - 0.008 (G) <1 (-) 0 (-) >0.05
rs115482851 chr6:32833537 PSMB9 [+6175bp] C - 12 C vs. G 0.008 (C) - >1 (-) 0 (-) >0.05

Association studies for this region [+]