PTRF, chr17:40554470-40575535 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8070757 chr17:40600319 RNU7-97P [+8042bp] All: C 108,990 15 C vs. A - - 0.92 (0.88-0.95) 31 (0-63) 1.19e-06
Meta_image?name=rs8070757

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8070757 chr17:40600319 RNU7-97P [+8042bp] All: C 108,990 15 C vs. A - - 0.92 (0.88-0.95) 31 (0-63) 1.19e-06
rs9907126 chr17:40613441 ATP6V0A1 All: C 108,990 15 C vs. T 0.258 (C) - 1.09 (1.05-1.13) 34 (0-64) 1.36e-06
rs9897702 chr17:40609405 ATP6V0A1 [-1457bp] All: C 108,990 15 A vs. G 0.258 (A) 0.033 (A) 1.09 (1.05-1.13) 32 (0-63) 1.45e-06
rs62075804 chr17:40599558 RNU7-97P [+7281bp] All: C 108,990 15 T vs. G 0.267 (T) 0.025 (T) 1.09 (1.05-1.13) 32 (0-63) 1.50e-06
rs9915118 chr17:40602533 ATP6V0A1 [-8329bp] All: C 108,990 15 G vs. A - - 0.92 (0.89-0.95) 32 (0-64) 1.60e-06
rs12943678 chr17:40607305 ATP6V0A1 [-3557bp] C - 13 A vs. T 0.258 (A) 0.033 (A) >1 (-) 22 (-) <0.05
rs4796664 chr17:40607608 ATP6V0A1 [-3254bp] C - 13 T vs. C 0.358 (C) 0.183 (C) <1 (-) 13 (-) <0.05
rs9252 chr17:40554849 PTRF C - 13 A vs. G 0.092 (A) 0.042 (A) <1 (-) 17 (-) <0.05
rs72823047 chr17:40563017 PTRF C - 13 A vs. G 0.233 (A) 0.325 (A) <1 (-) 0 (-) <0.05
rs1129422 chr17:40555799 PTRF C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs12600758 chr17:40566463 PTRF C - 13 T vs. C 0.275 (C) 0.242 (C) >1 (-) 0 (-) <0.05
rs111550283 chr17:40563106 PTRF C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs8067690 chr17:40553753 PTRF [-717bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs36005199 chr17:40597555 RNU7-97P [+5278bp] C - 13 A vs. G 0.275 (G) - >1 (-) 30 (-) <0.05
rs8074296 chr17:40583421 PTRF [+7886bp] C - 13 A vs. G 0.383 (G) 0.308 (G) >1 (-) 5 (-) <0.05
rs34807589 chr17:40624656 ATP6V0A1 C - 13 T vs. C - - <1 (-) 36 (-) <0.05
rs7222712 chr17:40564784 PTRF C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs8078850 chr17:40558663 PTRF C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs963986 chr17:40561579 PTRF C - 13 C vs. G 0.233 (C) 0.325 (C) <1 (-) 0 (-) <0.05
rs1032070 chr17:40618251 ATP6V0A1 C - 13 T vs. C 0.275 (T) 0.225 (T) <1 (-) 35 (-) <0.05
rs4365333 chr17:40562610 PTRF C - 13 C vs. G 0.233 (C) 0.325 (C) <1 (-) 0 (-) <0.05
rs34460267 chr17:40615865 ATP6V0A1 C - 13 T vs. C 0.275 (C) 0.225 (C) >1 (-) 34 (-) <0.05
rs1905339 chr17:40582296 PTRF [+6761bp] C - 13 T vs. C 0.383 (C) 0.325 (C) >1 (-) 3 (-) <0.05
rs56001200 chr17:40587919 RNU7-97P [-4297bp] C - 13 T vs. C - - >1 (-) 39 (-) <0.05
rs8068844 chr17:40571284 PTRF C - 13 T vs. C 0.383 (C) 0.317 (C) >1 (-) 2 (-) <0.05
rs12936869 chr17:40587936 RNU7-97P [-4280bp] C - 13 T vs. C - - >1 (-) 37 (-) <0.05
rs34762299 chr17:40605099 ATP6V0A1 [-5763bp] C - 13 A vs. G 0.208 (G) 0.033 (G) >1 (-) 8 (-) <0.05
rs34349578 chr17:40598129 RNU7-97P [+5852bp] C - 13 A vs. G - - <1 (-) 21 (-) <0.05
rs36075544 chr17:40598112 RNU7-97P [+5835bp] C - 13 T vs. C - - <1 (-) 21 (-) <0.05
rs35111218 chr17:40595572 RNU7-97P [+3295bp] C - 13 T vs. G - - <1 (-) 38 (-) <0.05
rs12948911 chr17:40598606 RNU7-97P [+6329bp] C - 13 T vs. C 0.208 (T) - <1 (-) 10 (-) <0.05
rs12951549 chr17:40593502 RNU7-97P [+1225bp] C - 13 T vs. C 0.258 (T) 0.075 (T) <1 (-) 37 (-) <0.05
rs12951640 chr17:40594298 RNU7-97P [+2021bp] C - 13 A vs. G 0.258 (A) 0.075 (A) <1 (-) 39 (-) <0.05
rs6503704 chr17:40592253 RNU7-97P C - 13 A vs. G 0.258 (A) 0.075 (A) <1 (-) 37 (-) <0.05
rs7213500 chr17:40586825 RNU7-97P [-5391bp] C - 13 A vs. G - - <1 (-) 37 (-) <0.05
rs71367913 chr17:40589869 RNU7-97P [-2347bp] C - 13 A vs. G 0.258 (A) - <1 (-) 38 (-) <0.05
rs35261210 chr17:40588316 RNU7-97P [-3900bp] C - 13 T vs. C 0.258 (T) 0.075 (T) <1 (-) 39 (-) <0.05
rs12943498 chr17:40593901 RNU7-97P [+1624bp] C - 13 T vs. C 0.258 (C) 0.075 (C) >1 (-) 36 (-) <0.05
rs11871801 chr17:40570772 PTRF C - 13 A vs. C 0.258 (C) 0.075 (C) >1 (-) 39 (-) <0.05
rs35272895 chr17:40580669 PTRF [+5134bp] C - 13 A vs. T 0.258 (A) 0.075 (A) <1 (-) 37 (-) <0.05
rs57203370 chr17:40586367 RNU7-97P [-5849bp] C - 13 C vs. G - - >1 (-) 34 (-) <0.05
rs12948909 chr17:40570602 PTRF C - 13 A vs. C 0.258 (C) 0.075 (C) >1 (-) 42 (-) <0.05
rs11867405 chr17:40570741 PTRF C - 13 T vs. C 0.258 (C) 0.075 (C) >1 (-) 39 (-) <0.05
rs7223784 chr17:40577580 PTRF [+2045bp] C - 13 A vs. C 0.258 (C) 0.075 (C) >1 (-) 41 (-) <0.05
rs12938856 chr17:40570649 PTRF C - 13 T vs. C 0.258 (C) 0.05 (C) >1 (-) 39 (-) <0.05
rs8081779 chr17:40571395 PTRF C - 13 A vs. G 0.267 (A) 0.075 (A) <1 (-) 39 (-) <0.05
rs8064439 chr17:40571409 PTRF C - 13 T vs. C - - <1 (-) 39 (-) <0.05
rs35510462 chr17:40570496 PTRF C - 13 A vs. G - - <1 (-) 39 (-) <0.05
rs78594996 chr17:40570109 PTRF C - 13 A vs. G 0.258 (G) 0.067 (G) >1 (-) 40 (-) <0.05
rs34610643 chr17:40574388 PTRF C - 13 A vs. C 0.258 (C) 0.075 (C) >1 (-) 40 (-) <0.05

Association studies for this region [+]