RNA5SP41, chr1:13949679-13949779 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12039802 chr1:13999286 PRDM2 [-27407bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12039802 chr1:13999286 PRDM2 [-27407bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs2495042 chr1:13996078 PRDM2 [-30615bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs2779781 chr1:13933167 PDPN C - 13 A vs. G 0.383 (A) 0.15 (A) >1 (-) 20 (-) <0.05
rs59593742 chr1:13934493 PDPN C - 13 A vs. G - - >1 (-) 20 (-) <0.05
rs35870640 chr1:13933855 PDPN C - 13 A vs. G 0.4 (G) 0.142 (G) <1 (-) 20 (-) <0.05
rs10927903 chr1:13912887 PDPN C - 13 A vs. G 0.192 (A) 0.033 (A) >1 (-) 0 (-) <0.05
rs12745692 chr1:13911563 PDPN C - 13 T vs. C 0.192 (T) 0.033 (T) >1 (-) 0 (-) <0.05
rs407829 chr1:13935141 PDPN C - 13 T vs. C 0.4 (T) 0.15 (T) >1 (-) 25 (-) <0.05
rs12757529 chr1:13909211 PDPN [-749bp] C - 13 A vs. G 0.2 (A) 0.033 (A) >1 (-) 0 (-) <0.05
rs35716585 chr1:13910927 PDPN C - 13 A vs. G 0.192 (G) - <1 (-) 0 (-) <0.05
rs41269211 chr1:13941112 PDPN C - 7 T vs. C - - <1 (-) 0 (-) <0.05
rs2495030 chr1:13990291 PRDM2 [-36402bp] C - 13 T vs. C 0.225 (T) 0.075 (T) <1 (-) 0 (-) <0.05
rs4370764 chr1:13916030 PDPN C - 13 A vs. T 0.317 (A) 0.133 (A) >1 (-) 0 (-) <0.05
rs34408904 chr1:13915424 PDPN C - 13 T vs. G - - >1 (-) 0 (-) <0.05
rs12075203 chr1:13916184 PDPN C - 13 A vs. G 0.342 (G) 0.125 (G) <1 (-) 0 (-) <0.05
rs12728383 chr1:13973941 RNA5SP41 [+24162bp] C - 3 A vs. G 0.217 (G) 0.142 (G) >1 (-) 0 (-) <0.05
rs442112 chr1:13932427 PDPN C - 13 T vs. C 0.458 (T) 0.325 (C) >1 (-) 37 (-) <0.05
rs114837014 chr1:13911236 PDPN C - 10 T vs. C 0.008 (C) - >1 (-) 0 (-) >0.05
rs80355898 chr1:13945932 PDPN [+1480bp] C - 3 A vs. G 0.15 (A) - >1 (-) 43 (-) >0.05
rs12066711 chr1:13906820 PDPN [-3140bp] C - 13 T vs. C 0.175 (T) - >1 (-) 0 (-) >0.05
rs680117 chr1:13902405 PDPN [-7555bp] C - 13 T vs. G 0.117 (T) 0.425 (G) <1 (-) 0 (-) >0.05
rs12070058 chr1:13906763 PDPN [-3197bp] C - 13 A vs. T 0.317 (A) - >1 (-) 0 (-) >0.05
rs12735797 chr1:13905218 PDPN [-4742bp] C - 13 A vs. G 0.317 (A) - >1 (-) 0 (-) >0.05
rs946332 chr1:13903715 PDPN [-6245bp] C - 13 T vs. C 0.217 (T) - >1 (-) 0 (-) >0.05
rs2361030 chr1:13906554 PDPN [-3406bp] C - 13 T vs. C 0.175 (T) - >1 (-) 0 (-) >0.05
rs10927904 chr1:13914909 PDPN C - 12 T vs. C 0.35 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs2885135 chr1:13906527 PDPN [-3433bp] C - 13 C vs. G 0.175 (C) - >1 (-) 0 (-) >0.05
rs11880 chr1:13942731 PDPN C - 13 T vs. C 0.392 (C) 0.15 (C) <1 (-) 16 (-) >0.05
rs1061615 chr1:13943724 PDPN C - 13 T vs. C 0.392 (C) 0.15 (C) <1 (-) 16 (-) >0.05
rs3820304 chr1:13938788 PDPN C - 13 A vs. G 0.392 (G) 0.15 (G) <1 (-) 16 (-) >0.05
rs12066556 chr1:13914831 PDPN C - 9 T vs. G 0.042 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs2483133 chr1:13934056 PDPN C - 13 T vs. C 0.3 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs1772636 chr1:13947519 RNA5SP41 [-2160bp] C - 13 A vs. G 0.408 (G) 0.15 (G) <1 (-) 13 (-) >0.05
rs12069322 chr1:13916386 PDPN C - 9 A vs. G - 0.033 (A) >1 (-) 0 (-) >0.05
rs4542209 chr1:13945118 PDPN [+666bp] C - 13 T vs. C 0.392 (T) 0.15 (T) >1 (-) 15 (-) >0.05
rs9651090 chr1:13945726 PDPN [+1274bp] C - 13 T vs. C 0.392 (T) 0.142 (T) >1 (-) 15 (-) >0.05
rs1767676 chr1:13946868 PDPN [+2416bp] C - 13 A vs. G 0.408 (A) 0.2 (A) >1 (-) 7 (-) >0.05
rs1148455 chr1:13914230 PDPN C - 13 T vs. C 0.275 (T) 0.375 (C) >1 (-) 0 (-) >0.05
rs61777777 chr1:13906611 PDPN [-3349bp] C - 7 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs1106669 chr1:13945379 PDPN [+927bp] C - 13 T vs. C 0.408 (T) 0.2 (T) >1 (-) 8 (-) >0.05
rs4489551 chr1:13969894 RNA5SP41 [+20115bp] C - 13 T vs. C 0.083 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs16851817 chr1:13903441 PDPN [-6519bp] C - 5 A vs. G - 0.033 (A) <1 (-) 0 (-) >0.05
rs146139856 chr1:13913540 PDPN C - 8 A vs. G - - >1 (-) 48 (-) >0.05
rs143344366 chr1:13970265 RNA5SP41 [+20486bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4328067 chr1:13970276 RNA5SP41 [+20497bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12130956 chr1:13992029 PRDM2 [-34664bp] C - 12 A vs. G 0.4 (A) 0.092 (A) >1 (-) 0 (-) >0.05
rs115599599 chr1:13970856 RNA5SP41 [+21077bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs77407013 chr1:13914064 PDPN C - 3 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs12144423 chr1:13951715 RNA5SP41 [+1936bp] C - 13 A vs. G 0.458 (A) 0.275 (G) <1 (-) 0 (-) >0.05
rs147256000 chr1:13970226 RNA5SP41 [+20447bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.